Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-440P-201ENST00000390882 105 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 RPL39P34-201ENST00000477141 156 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 AP003484.1-201ENST00000530974 250 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 MIR8054-201ENST00000620877 86 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.73□□□□□ -1.97
SSU72Q9NP77 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SSU72Q9NP77 Y_RNA.265-201ENST00000364677 108 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 SNORA51.5-201ENST00000384126 131 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 RNY1P6-201ENST00000384193 109 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 MIR183-201ENST00000384958 110 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 AC107083.1-201ENST00000439643 279 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSU72Q9NP77 AC114811.1-201ENST00000507207 168 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 RNU7-28P-201ENST00000516759 62 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 SUMO2P16-201ENST00000519475 264 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 AC084364.2-201ENST00000546924 395 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.72□□□□□ -1.97
SSU72Q9NP77 AC021443.1-201ENST00000604478 211 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 MIR6075-201ENST00000620782 95 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
SSU72Q9NP77 U6.105-201ENST00000637379 88 ntBASIC2.72□□□□□ -1.97
SSU72Q9NP77 RNY4P6-201ENST00000363667 96 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 U8.6-201ENST00000364939 135 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 Y_RNA.344-201ENST00000365381 112 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 MIR449B-201ENST00000384995 97 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
SSU72Q9NP77 RNU7-123P-201ENST00000515911 60 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 RNU2-35P-201ENST00000516446 142 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 SNORA67.7-201ENST00000516664 135 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 AC022523.2-201ENST00000561045 150 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 MIR3944-201ENST00000581277 108 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 MIR7975-201ENST00000619350 68 ntBASIC2.71□□□□□ -1.98
SSU72Q9NP77 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSU72Q9NP77 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.71□□□□□ -1.98
SSU72Q9NP77 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSU72Q9NP77 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSU72Q9NP77 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.7□□□□□ -1.98
SSU72Q9NP77 SNORD115-3-201ENST00000363100 82 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 Y_RNA.351-201ENST00000365436 96 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 Y_RNA.494-201ENST00000384432 111 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 MIR7-3-201ENST00000384898 110 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 MIR1302-5-201ENST00000408164 150 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 BX510359.4-201ENST00000423750 193 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC087499.4-201ENST00000448505 178 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.7□□□□□ -1.98
SSU72Q9NP77 MIR4429-201ENST00000580105 73 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC005000.2-201ENST00000605468 310 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC015726.2-201ENST00000620112 122 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC091932.4-201ENST00000623386 200 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC245060.5-201ENST00000610778 3293 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.7□□□□□ -1.98
SSU72Q9NP77 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SSU72Q9NP77 AL589743.1-201ENST00000551932 2712 ntBASIC2.7□□□□□ -1.98
SSU72Q9NP77 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.69□□□□□ -1.98
SSU72Q9NP77 ICE2P2-201ENST00000483823 2787 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 RNU1-58P-201ENST00000362413 163 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 RNU1-133P-201ENST00000364867 167 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 MIR670-201ENST00000390142 98 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 RNA5SP120-201ENST00000410900 112 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 Z92545.1-201ENST00000411782 234 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 RPS12P2-201ENST00000439728 269 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 STAG3L5P-204ENST00000443759 179 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 RNU7-164P-201ENST00000459221 62 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.69□□□□□ -1.98
SSU72Q9NP77 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.69□□□□□ -1.98
SSU72Q9NP77 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 AC005786.1-201ENST00000588553 154 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 AL162274.2-201ENST00000614406 332 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.69□□□□□ -1.98
SSU72Q9NP77 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
SSU72Q9NP77 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSU72Q9NP77 Y_RNA.49-201ENST00000362714 112 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 RNU6-414P-201ENST00000363705 104 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 RNU1-148P-201ENST00000384472 162 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 SNORA19.1-201ENST00000410656 129 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 AC068339.1-201ENST00000526965 141 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 MIR5009-201ENST00000578736 100 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 MIR4305-201ENST00000583252 102 ntBASIC2.68□□□□□ -1.98
SSU72Q9NP77 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SSU72Q9NP77 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SSU72Q9NP77 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSU72Q9NP77 Y_RNA.213-201ENST00000364178 111 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 RNU6-49P-201ENST00000384256 107 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 U8.17-201ENST00000391292 132 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 HSPE1P9-201ENST00000440046 311 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 RN7SL504P-201ENST00000494496 287 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 RNU6-109P-201ENST00000516364 107 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 SNORA74D-201ENST00000516404 141 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 RNU6-184P-201ENST00000516514 107 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 SNORA18.7-201ENST00000516910 131 ntBASIC2.67□□□□□ -1.98
SSU72Q9NP77 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSU72Q9NP77 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSU72Q9NP77 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSU72Q9NP77 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
SSU72Q9NP77 AL596211.1-201ENST00000569873 2277 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms