Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1272P-201ENST00000362776 107 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.447-201ENST00000384184 113 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 MIR520G-201ENST00000385064 90 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 AC104332.1-201ENST00000440471 797 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 RNU7-141P-201ENST00000459304 62 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.680-201ENST00000516441 93 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 MIR4643-201ENST00000577473 78 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 AC022709.1-201ENST00000615967 87 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 MIR6515-201ENST00000619843 57 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 SNORD27-201ENST00000363981 72 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 MIR548H3-201ENST00000408771 118 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 COX6CP10-201ENST00000416832 224 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 BTF3P11-201ENST00000426582 477 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 RNU7-115P-201ENST00000516433 55 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 AC024405.2-202ENST00000532731 184 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 AP000942.4-201ENST00000604811 241 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 SNORA1B-201ENST00000362535 133 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU6-950P-201ENST00000384651 107 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR562-201ENST00000384894 95 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RN7SKP200-201ENST00000410564 320 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU7-116P-201ENST00000516940 62 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR4709-201ENST00000577272 72 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AL162424.1-201ENST00000602325 221 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AP003357.1-201ENST00000604497 148 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AL008718.3-201ENST00000610217 321 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AL078604.3-201ENST00000615580 211 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR548AY-201ENST00000617669 107 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.17
RTP3Q9BQQ7 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-899P-201ENST00000363947 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-203P-201ENST00000384038 104 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-211P-201ENST00000384047 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 SNORA72-201ENST00000384339 132 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 SNORA36B-201ENST00000410438 131 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AL049830.1-201ENST00000468034 425 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC099513.1-201ENST00000490423 301 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RPL23AP54-201ENST00000495129 419 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 MIR5692C2-201ENST00000577959 77 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC013791.1-201ENST00000616619 62 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 MIR6779-201ENST00000617283 64 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU6-414P-201ENST00000363705 104 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 SNORA20.1-201ENST00000364790 130 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU7-34P-201ENST00000459394 64 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU2-56P-201ENST00000516826 190 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AL358944.1-201ENST00000528537 144 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC127455.1-201ENST00000565496 145 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC006006.1-201ENST00000603082 144 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 BX284668.6-201ENST00000606899 438 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC021506.2-201ENST00000612354 169 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.20-201ENST00000362479 113 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.82-201ENST00000363000 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.92-201ENST00000363043 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.235-201ENST00000364412 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.306-201ENST00000365015 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.312-201ENST00000365089 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.322-201ENST00000365151 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms