Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.79□□□□□ -2.12
PKP4Q99569 AC109810.1-201ENST00000534066 224 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.79□□□□□ -2.12
PKP4Q99569 SUB1P4-201ENST00000566062 339 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 AL359075.3-201ENST00000613288 217 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.79□□□□□ -2.12
PKP4Q99569 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKP4Q99569 Y_RNA.8-201ENST00000362353 102 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 Y_RNA.272-201ENST00000364696 102 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 RNY1P5-201ENST00000383890 115 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 RNY3P5-201ENST00000384127 102 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 MIR515-2-201ENST00000384883 83 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 MIR515-1-201ENST00000384884 83 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 MIR520G-201ENST00000385064 90 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 Y_RNA.580-201ENST00000391004 95 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 RNA5SP496-201ENST00000391240 109 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 RNA5SP467-201ENST00000391274 118 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 SEPT7P4-201ENST00000437076 306 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 RNU1-142P-201ENST00000516682 145 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 RNU6-1096P-201ENST00000517089 102 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.78□□□□□ -2.12
PKP4Q99569 MIR3133-201ENST00000583157 78 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 AC073413.2-201ENST00000604332 360 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.78□□□□□ -2.12
PKP4Q99569 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PKP4Q99569 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
PKP4Q99569 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PKP4Q99569 RNU4-84P-201ENST00000364200 139 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 Y_RNA.398-201ENST00000383952 99 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 RNU6-125P-201ENST00000384505 107 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 MT-TT-201ENST00000387460 66 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PKP4Q99569 AL117342.1-201ENST00000404861 406 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 AL606845.1-201ENST00000404881 255 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.77□□□□□ -2.13
PKP4Q99569 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 AC108210.2-201ENST00000503681 201 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 RNU6-237P-201ENST00000515985 71 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 RNU7-200P-201ENST00000516105 62 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 RNU7-128P-201ENST00000517247 62 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 AC011604.1-201ENST00000545978 196 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 MIR4431-201ENST00000579990 94 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 MIR2681-201ENST00000581814 105 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 AL929325.1-201ENST00000603096 117 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 AC022513.1-201ENST00000624512 117 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 MTND1P7-201ENST00000632801 297 ntBASIC1.77□□□□□ -2.13
PKP4Q99569 Y_RNA.203-201ENST00000364106 102 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 RNU6-728P-201ENST00000365375 104 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 RNA5SP323-201ENST00000391094 133 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 MIR1289-2-201ENST00000408360 111 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 MIR1278-201ENST00000408753 81 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 CST2P1-201ENST00000425770 87 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 AL121914.1-201ENST00000450188 156 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 MTND5P41-201ENST00000517498 206 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 AC024995.1-201ENST00000523014 93 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.76□□□□□ -2.13
PKP4Q99569 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.76□□□□□ -2.13
PKP4Q99569 AC245060.5-201ENST00000610778 3293 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 AC100821.1-201ENST00000523153 2479 ntBASIC1.76□□□□□ -2.13
PKP4Q99569 RNU6-862P-201ENST00000362804 105 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 U8.13-201ENST00000390842 128 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 RNU6-239P-201ENST00000390990 99 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 AC091178.2-201ENST00000584401 117 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 AL021707.8-201ENST00000609428 183 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 U6.108-201ENST00000637764 58 ntBASIC1.75□□□□□ -2.13
PKP4Q99569 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PKP4Q99569 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PKP4Q99569 AC018630.2-201ENST00000534866 2403 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU6-449P-201ENST00000383914 107 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 SNORD116-18-201ENST00000383961 92 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU6-187P-201ENST00000384139 106 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 MIR15B-201ENST00000385045 98 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 AL591806.2-201ENST00000433122 173 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU7-94P-201ENST00000459576 63 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RPS26P45-201ENST00000471748 340 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RPL23AP63-201ENST00000498752 471 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 AC107027.2-201ENST00000512197 115 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU7-121P-201ENST00000516604 62 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU6-341P-201ENST00000516973 96 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU6-548P-201ENST00000517083 115 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 RNU6-789P-201ENST00000517105 102 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
PKP4Q99569 AL358944.1-201ENST00000528537 144 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 MIR6079-201ENST00000635807 62 ntBASIC1.74□□□□□ -2.13
PKP4Q99569 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
PKP4Q99569 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
PKP4Q99569 SNORA33-201ENST00000363664 130 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 RNU6-1130P-201ENST00000365434 107 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 Y_RNA.587-201ENST00000391210 103 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 RNU4-43P-201ENST00000410628 137 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms