Protein–RNA interactions for Protein: Q8NG31

KNL1, Kinetochore scaffold 1, humanhuman

Predictions only

Length 2,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1Q8NG31 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.15□□□□□ -2.59
KNL1Q8NG31 RNU7-104P-201ENST00000459398 79 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 MIR4491-201ENST00000581087 68 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 AC073648.5-201ENST00000603502 305 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 AC078880.5-201ENST00000617845 421 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 AC126544.2-201ENST00000625174 749 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 RNU6-960P-201ENST00000364056 120 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 RNU6-407P-201ENST00000365280 104 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.15□□□□□ -2.59
KNL1Q8NG31 MTATP6P2-201ENST00000603319 678 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 AL445435.1-201ENST00000604232 665 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 AC131235.4-201ENST00000609288 620 ntBASIC-1.15□□□□□ -2.59
KNL1Q8NG31 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 SNORD115-35-201ENST00000365122 82 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 MIR617-201ENST00000385030 97 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 RNU2-51P-201ENST00000410708 197 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 RPL7P42-201ENST00000481005 679 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 RNA5SP272-201ENST00000516095 111 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 AL391834.2-201ENST00000609982 546 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 MTND1P7-201ENST00000632801 297 ntBASIC-1.16□□□□□ -2.59
KNL1Q8NG31 SNORD114-29-201ENST00000364819 70 ntBASIC-1.16□□□□□ -2.6
KNL1Q8NG31 MIR147A-201ENST00000385079 72 ntBASIC-1.16□□□□□ -2.6
KNL1Q8NG31 RNU6-607P-201ENST00000411283 108 ntBASIC-1.16□□□□□ -2.6
KNL1Q8NG31 RNU6-685P-201ENST00000517088 95 ntBASIC-1.16□□□□□ -2.6
KNL1Q8NG31 ELOCP32-201ENST00000548625 324 ntBASIC-1.16□□□□□ -2.6
KNL1Q8NG31 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.16□□□□□ -2.6
KNL1Q8NG31 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.16□□□□□ -2.6
KNL1Q8NG31 MIR30D-201ENST00000362283 70 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 SNORD87-201ENST00000364849 89 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 MIR522-201ENST00000385071 87 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
KNL1Q8NG31 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNY4-201ENST00000516507 96 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 AC073343.1-201ENST00000328239 651 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-228P-201ENST00000362700 106 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 SNORA63.5-201ENST00000363548 123 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 SNORD114-17-201ENST00000364699 75 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-117P-201ENST00000365415 107 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-827P-201ENST00000365553 106 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-354P-201ENST00000383862 107 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-610P-201ENST00000384264 107 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU4-55P-201ENST00000410731 137 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.17□□□□□ -2.6
KNL1Q8NG31 MRPS10P1-201ENST00000448483 130 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 MIR4473-201ENST00000583731 91 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 Z97988.1-201ENST00000637697 135 ntBASIC-1.17□□□□□ -2.6
KNL1Q8NG31 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 MTCO2P11-201ENST00000431069 680 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 MTND3P25-201ENST00000509243 135 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 MTND1P5-201ENST00000517906 940 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 AC007012.1-201ENST00000567192 175 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 RNU6-403P-201ENST00000363163 104 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 MIR320B2-201ENST00000408479 138 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 AL008987.1-201ENST00000415528 237 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 RNU6-437P-201ENST00000459408 95 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 SNORD123-201ENST00000459473 70 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 AL133255.1-201ENST00000606374 441 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 MIR8055-201ENST00000610739 97 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 MIR6818-201ENST00000621576 65 ntBASIC-1.18□□□□□ -2.6
KNL1Q8NG31 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.19□□□□□ -2.6
KNL1Q8NG31 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.19□□□□□ -2.6
KNL1Q8NG31 AL031667.1-201ENST00000440222 725 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 SNORD2-201ENST00000459163 69 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 AC245505.1-201ENST00000556398 224 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 AC005776.1-201ENST00000603164 290 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 DISC2.1-201ENST00000612827 205 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 MIR8066-201ENST00000617280 78 ntBASIC-1.19□□□□□ -2.6
KNL1Q8NG31 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AL606845.1-201ENST00000404881 255 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AC091133.4-201ENST00000511142 308 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AC018714.1-201ENST00000605028 208 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AC013437.2-201ENST00000639587 677 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 RNU6-541P-201ENST00000384709 110 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 RNU2-29P-201ENST00000410423 189 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AC022028.1-201ENST00000412054 408 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AL359672.1-201ENST00000442302 409 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 RNU7-67P-201ENST00000459003 62 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.2□□□□□ -2.6
KNL1Q8NG31 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.2□□□□□ -2.6
KNL1Q8NG31 RNU6-442P-201ENST00000383968 104 ntBASIC-1.21□□□□□ -2.6
KNL1Q8NG31 RNU6-131P-201ENST00000391144 107 ntBASIC-1.21□□□□□ -2.6
KNL1Q8NG31 AC096949.1-201ENST00000412047 152 ntBASIC-1.21□□□□□ -2.6
KNL1Q8NG31 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.21□□□□□ -2.6
KNL1Q8NG31 AL049777.1-201ENST00000622740 518 ntBASIC-1.21□□□□□ -2.6
KNL1Q8NG31 AC091931.1-201ENST00000623488 728 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms