Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SNORA72-201ENST00000384339 132 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 RNU6-440P-201ENST00000390882 105 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 PGBD4P5-201ENST00000445958 426 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 AP002004.2-201ENST00000531656 154 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 AC012433.1-201ENST00000588916 398 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 U8.7-201ENST00000364940 136 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 RNU6-763P-201ENST00000390865 106 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 SNORD58.1-201ENST00000391313 66 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AL034345.1-201ENST00000407768 123 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 RNU2-38P-201ENST00000410856 79 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 SNORD2.1-201ENST00000458762 69 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 RNU7-141P-201ENST00000459304 62 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 MTND1P19-201ENST00000511780 315 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AC108729.3-201ENST00000513484 108 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AC004817.2-201ENST00000561794 651 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AC127455.1-201ENST00000565496 145 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 MIR3149-201ENST00000584629 83 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AL512605.2-201ENST00000592972 256 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 MIR548AY-201ENST00000617669 107 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 AC068647.2-201ENST00000637380 353 ntBASIC1.3□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-702P-201ENST00000364982 107 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-514P-201ENST00000384208 107 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-574P-201ENST00000384265 107 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-136P-201ENST00000384663 107 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 OR9P1P-201ENST00000496431 281 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 RNU7-28P-201ENST00000516759 62 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AC024405.2-202ENST00000532731 184 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AC011604.1-201ENST00000545978 196 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.29□□□□□ -2.2
RTL3Q8N8U3 MIR4282-201ENST00000583613 67 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AL162424.1-201ENST00000602325 221 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 snoU13.31-201ENST00000607291 104 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AC062037.2-201ENST00000610137 73 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AL008718.3-201ENST00000610217 321 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 AC068700.1-201ENST00000565862 3754 ntBASIC1.29□□□□□ -2.2
RTL3Q8N8U3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
RTL3Q8N8U3 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 RNU6-674P-201ENST00000363831 107 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 RNU6-899P-201ENST00000363947 107 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 RNU6-969P-201ENST00000383900 105 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 RNU6-662P-201ENST00000384253 104 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.28□□□□□ -2.2
RTL3Q8N8U3 U8.19-201ENST00000459095 133 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.28□□□□□ -2.2
RTL3Q8N8U3 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 MIR4762-201ENST00000585261 75 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 POLR3GP1-201ENST00000594073 261 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 AC013791.1-201ENST00000616619 62 ntBASIC1.28□□□□□ -2.2
RTL3Q8N8U3 U8.5-201ENST00000364528 136 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 RNU6-740P-201ENST00000364734 105 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 RNA5SP482-201ENST00000391269 118 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
RTL3Q8N8U3 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 RPL39P38-201ENST00000467018 153 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 AL049830.1-201ENST00000468034 425 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 AC117454.1-201ENST00000491120 168 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 MIR4643-201ENST00000577473 78 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 AC005357.1-201ENST00000588399 301 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.27□□□□□ -2.21
RTL3Q8N8U3 snoU18.1-201ENST00000629629 71 ntBASIC1.27□□□□□ -2.21
RTL3Q8N8U3 MIRLET7C-201ENST00000362160 84 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 RNU4-41P-201ENST00000364426 143 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 RNU6-1289P-201ENST00000384431 106 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms