Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC022513.1-201ENST00000624512 117 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 SNORA72-201ENST00000384339 132 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 SNORA40-201ENST00000388090 126 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 MIR1261-201ENST00000408659 82 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 SNORA36B-201ENST00000410438 131 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 HMGN2P3-201ENST00000433603 273 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 HMGN2P5-201ENST00000436882 273 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 AC245047.8-201ENST00000456455 284 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 RPL23AP54-201ENST00000495129 419 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 AC069114.2-201ENST00000604699 304 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 U6.108-201ENST00000637764 58 ntBASIC2.02□□□□□ -2.09
RFX6Q8HWS3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RFX6Q8HWS3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.127-201ENST00000363386 109 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RPL30P13-201ENST00000418873 348 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 AC008267.6-201ENST00000441664 139 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RNU7-94P-201ENST00000459576 63 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RPS26P45-201ENST00000471748 340 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RNU6-971P-201ENST00000516920 106 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX6Q8HWS3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX6Q8HWS3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.01□□□□□ -2.09
RFX6Q8HWS3 AC018630.2-201ENST00000534866 2403 ntBASIC2.01□□□□□ -2.09
RFX6Q8HWS3 MIR367-201ENST00000362299 68 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.71-201ENST00000362892 104 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 RNY1P11-201ENST00000363759 113 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 RNU6-215P-201ENST00000365169 102 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.337-201ENST00000365312 102 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 SNORA20-201ENST00000384662 132 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 MIR562-201ENST00000384894 95 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
RFX6Q8HWS3 AL606845.1-201ENST00000404881 255 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 RPL23AP6-201ENST00000446637 472 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 RPS4XP11-201ENST00000446897 772 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 AC092991.1-201ENST00000477176 376 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 TRBV12-1-201ENST00000479785 344 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 AL163195.1-201ENST00000496941 348 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 SNORA25.12-201ENST00000516202 82 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 RNU6-1007P-201ENST00000516586 107 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 MIR5094-201ENST00000578766 85 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
RFX6Q8HWS3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
RFX6Q8HWS3 MIR6079-201ENST00000635807 62 ntBASIC2□□□□□ -2.09
RFX6Q8HWS3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RFX6Q8HWS3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 RNU6-643P-201ENST00000384018 107 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 SNORD20-201ENST00000384550 80 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 MIR15B-201ENST00000385045 98 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RFX6Q8HWS3 MIR513C-201ENST00000401352 84 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 RNU4-43P-201ENST00000410628 137 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 RNU6-383P-201ENST00000410864 94 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RFX6Q8HWS3 RNU6-437P-201ENST00000459408 95 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 AC011604.1-201ENST00000545978 196 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 AC112693.2-201ENST00000556538 232 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 MIR4724-201ENST00000579485 89 ntBASIC1.99□□□□□ -2.09
RFX6Q8HWS3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX6Q8HWS3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
RFX6Q8HWS3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 SNORD116-14-201ENST00000383894 92 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 SNORD116-17-201ENST00000383929 92 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.420-201ENST00000384043 110 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 SNORD116-15-201ENST00000384445 92 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 RNU6-768P-201ENST00000384683 107 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 SNORD116-19-201ENST00000384729 92 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 SNORA48.1-201ENST00000390879 135 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AC006461.1-201ENST00000412637 326 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AC069257.2-201ENST00000441819 155 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AL121914.1-201ENST00000450188 156 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 RNU6-341P-201ENST00000516973 96 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX6Q8HWS3 MIR3646-201ENST00000578301 84 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AC091178.2-201ENST00000584401 117 ntBASIC1.98□□□□□ -2.09
RFX6Q8HWS3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX6Q8HWS3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RFX6Q8HWS3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFX6Q8HWS3 RNU6-674P-201ENST00000363831 107 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms