Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 U2.1-201ENST00000618978 145 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 SNORD50B-201ENST00000364995 70 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 Y_RNA.330-201ENST00000365230 109 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 Y_RNA.462-201ENST00000384268 102 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 RNU6-1065P-201ENST00000384513 106 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 Y_RNA.529-201ENST00000384586 119 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 RNU7-115P-201ENST00000516433 55 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 RNU6-1007P-201ENST00000516586 107 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 AP003357.1-201ENST00000604497 148 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 JPX_2.1-201ENST00000614161 69 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 Pinc.1-201ENST00000616452 154 ntBASIC0.6□□□□□ -2.31
SCN4AP35499 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
SCN4AP35499 Y_RNA.160-201ENST00000363677 92 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 SNORD113.3-201ENST00000364630 78 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 Y_RNA.383-201ENST00000383855 97 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RNU6-1040P-201ENST00000383974 107 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RNU6-1297P-201ENST00000384415 104 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 CALM2P4-201ENST00000430810 426 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 AC233266.1-201ENST00000454518 96 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RPL30P15-201ENST00000457129 321 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RPL23AP54-201ENST00000495129 419 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RNU4-57P-201ENST00000515980 135 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RNU7-40P-201ENST00000516397 64 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 SNORA18.7-201ENST00000516910 131 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN4AP35499 MIR4661-201ENST00000582720 75 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 AC242852.1-201ENST00000612151 96 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 AC244015.1-201ENST00000622301 99 ntBASIC0.59□□□□□ -2.31
SCN4AP35499 RNA5SP327-201ENST00000362494 101 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 Y_RNA.230-201ENST00000364348 109 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 Y_RNA.463-201ENST00000384271 102 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 RNU2-61P-201ENST00000411069 191 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN4AP35499 AC245047.8-201ENST00000456455 284 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 RNU7-116P-201ENST00000516940 62 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 AC012676.2-201ENST00000619258 186 ntBASIC0.59□□□□□ -2.32
SCN4AP35499 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
SCN4AP35499 RNU4-79P-201ENST00000362764 141 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 Y_RNA.124-201ENST00000363339 93 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 SNORD114-24-201ENST00000365029 72 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 Y_RNA.471-201ENST00000384312 102 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 RNU6-310P-201ENST00000384655 107 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 Y_RNA.570-201ENST00000384750 101 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 RNY4P36-201ENST00000391116 96 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 SNORA75.6-201ENST00000391318 127 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN4AP35499 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN4AP35499 Y_RNA.632-201ENST00000459189 102 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 AC022493.2-201ENST00000506122 481 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 Y_RNA.713-201ENST00000517013 96 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 MIR5692C2-201ENST00000577959 77 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 MIR4659A-201ENST00000580269 81 ntBASIC0.58□□□□□ -2.32
SCN4AP35499 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SCN4AP35499 Y_RNA.537-201ENST00000384626 109 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 RNU6-1248P-201ENST00000391096 64 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 MIR942-201ENST00000401111 86 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AL390729.2-201ENST00000416137 156 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 MTCO2P27-201ENST00000420740 428 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN4AP35499 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN4AP35499 U7.7-201ENST00000459276 60 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.57□□□□□ -2.32
SCN4AP35499 RNU6-1116P-201ENST00000517269 99 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC090142.3-201ENST00000519012 385 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC011373.1-201ENST00000607270 237 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC104985.2-201ENST00000620598 500 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC099654.14-201ENST00000638599 341 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 Y_RNA.242-201ENST00000364473 110 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC096644.2-201ENST00000429278 159 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 RPEP5-201ENST00000441137 268 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 FGF7P4-201ENST00000509595 295 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 RNU6-1096P-201ENST00000517089 102 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 AC138305.3-201ENST00000624988 240 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 MTND4LP32-201ENST00000636111 270 ntBASIC0.57□□□□□ -2.32
SCN4AP35499 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SCN4AP35499 MIR103A2-201ENST00000362154 78 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 SNORA25.3-201ENST00000363205 127 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 Y_RNA.143-201ENST00000363520 106 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 SNORA72-201ENST00000384339 132 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 MIR516B2-201ENST00000385190 85 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 RNU1-119P-201ENST00000391122 165 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 AC100767.1-201ENST00000528178 123 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 AC025627.3-201ENST00000582078 182 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 AC104695.3-201ENST00000604052 296 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 AC010205.1-201ENST00000616668 449 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 AC073349.3-201ENST00000617616 186 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN4AP35499 U6.92-201ENST00000636464 89 ntBASIC0.56□□□□□ -2.32
SCN4AP35499 RNU6-396P-201ENST00000365369 105 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 RNU6-969P-201ENST00000383900 105 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 Y_RNA.384-201ENST00000383909 102 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 RNY3P14-201ENST00000384309 102 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 MIR522-201ENST00000385071 87 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 MIR100-201ENST00000385259 80 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms