Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 MIR4769-201ENST00000584126 77 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RPL17P51-201ENST00000605218 238 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 AL159152.1-201ENST00000635019 2587 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 RNU6-834P-201ENST00000362367 110 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 RNU6-1056P-201ENST00000383996 107 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 MIR29B2-201ENST00000385055 81 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 MIR300-201ENST00000401138 83 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 MTCO1P44-201ENST00000441935 243 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 AL158147.1-201ENST00000443970 75 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 SNORD11-201ENST00000459124 84 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 SNORD33.1-201ENST00000516213 88 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 RNU6-781P-201ENST00000516377 101 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.709-201ENST00000516952 92 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 RPL23AP91-201ENST00000569211 455 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 MIR4753-201ENST00000585119 83 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
SNHG28P0DPA3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.114-201ENST00000363265 113 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 RNU1-23P-201ENST00000363361 144 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 MIR218-1-201ENST00000384999 110 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 MIR767-201ENST00000390228 109 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 AC080013.2-201ENST00000460866 323 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 IGKV1-22-201ENST00000524313 326 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
SNHG28P0DPA3 MIR3616-201ENST00000584070 92 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 MIR4658-201ENST00000584344 65 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 UCA1.1-201ENST00000620952 75 ntBASIC2.05□□□□□ -2.08
SNHG28P0DPA3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNHG28P0DPA3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNHG28P0DPA3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNHG28P0DPA3 RNU6-461P-201ENST00000364195 107 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 RNA5SP496-201ENST00000391240 109 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 AL627390.1-201ENST00000396055 340 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.651-201ENST00000459380 103 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 SNORD77.4-201ENST00000516158 81 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 RNU7-116P-201ENST00000516940 62 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 AC018630.3-201ENST00000542637 96 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 AC090049.2-201ENST00000550377 109 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.04□□□□□ -2.08
SNHG28P0DPA3 MIR3613-201ENST00000579844 87 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 AL670379.2-201ENST00000604983 252 ntBASIC2.04□□□□□ -2.08
SNHG28P0DPA3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-271P-201ENST00000363858 105 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-743P-201ENST00000364151 106 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-755P-201ENST00000364400 103 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 SNORA22-201ENST00000383907 134 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-147P-201ENST00000383983 107 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 SNORA72-201ENST00000384339 132 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.617-201ENST00000410920 90 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.03□□□□□ -2.08
SNHG28P0DPA3 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 AC245047.4-201ENST00000433189 144 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU7-26P-201ENST00000458980 63 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-498P-201ENST00000459468 107 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RPS27P22-201ENST00000478056 241 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU6-948P-201ENST00000516374 107 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 RNU7-128P-201ENST00000517247 62 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 AC007751.1-201ENST00000529260 376 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 CYCSP26-201ENST00000534107 320 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.03□□□□□ -2.08
SNHG28P0DPA3 MTND5P34-201ENST00000568888 325 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 AC097639.2-201ENST00000603159 172 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 uc_338.4-201ENST00000616635 176 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 AL449363.1-201ENST00000617815 186 ntBASIC2.03□□□□□ -2.08
SNHG28P0DPA3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
SNHG28P0DPA3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
SNHG28P0DPA3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 SNORA1-201ENST00000384107 130 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 MIR562-201ENST00000384894 95 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 RNU6-482P-201ENST00000391068 107 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 RNU2-55P-201ENST00000411146 174 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 AC063976.4-201ENST00000421971 163 ntBASIC2.02□□□□□ -2.09
SNHG28P0DPA3 CYCTP-201ENST00000504253 315 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms