Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
PHF1O43189 Y_RNA.36-201ENST00000362602 112 ntBASIC1.32□□□□□ -2.2
PHF1O43189 RNU6-740P-201ENST00000364734 105 ntBASIC1.32□□□□□ -2.2
PHF1O43189 U8.7-201ENST00000364940 136 ntBASIC1.32□□□□□ -2.2
PHF1O43189 RNU6-662P-201ENST00000384253 104 ntBASIC1.32□□□□□ -2.2
PHF1O43189 AL603910.2-201ENST00000407268 136 ntBASIC1.32□□□□□ -2.2
PHF1O43189 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
PHF1O43189 HSPE1P9-201ENST00000440046 311 ntBASIC1.32□□□□□ -2.2
PHF1O43189 AC099513.1-201ENST00000490423 301 ntBASIC1.32□□□□□ -2.2
PHF1O43189 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
PHF1O43189 RNU6-1023P-201ENST00000516137 106 ntBASIC1.32□□□□□ -2.2
PHF1O43189 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
PHF1O43189 MIR4643-201ENST00000577473 78 ntBASIC1.32□□□□□ -2.2
PHF1O43189 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
PHF1O43189 AC011921.3-201ENST00000605540 361 ntBASIC1.32□□□□□ -2.2
PHF1O43189 AC013791.1-201ENST00000616619 62 ntBASIC1.32□□□□□ -2.2
PHF1O43189 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.32□□□□□ -2.2
PHF1O43189 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PHF1O43189 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PHF1O43189 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
PHF1O43189 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
PHF1O43189 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
PHF1O43189 RNU6-674P-201ENST00000363831 107 ntBASIC1.31□□□□□ -2.2
PHF1O43189 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
PHF1O43189 Y_RNA.307-201ENST00000365022 117 ntBASIC1.31□□□□□ -2.2
PHF1O43189 RNU6-969P-201ENST00000383900 105 ntBASIC1.31□□□□□ -2.2
PHF1O43189 Y_RNA.478-201ENST00000384358 107 ntBASIC1.31□□□□□ -2.2
PHF1O43189 RNU6-1289P-201ENST00000384431 106 ntBASIC1.31□□□□□ -2.2
PHF1O43189 Y_RNA.539-201ENST00000384635 107 ntBASIC1.31□□□□□ -2.2
PHF1O43189 RNU6-950P-201ENST00000384651 107 ntBASIC1.31□□□□□ -2.2
PHF1O43189 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
PHF1O43189 U8.19-201ENST00000459095 133 ntBASIC1.31□□□□□ -2.2
PHF1O43189 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.31□□□□□ -2.2
PHF1O43189 AC005357.1-201ENST00000588399 301 ntBASIC1.31□□□□□ -2.2
PHF1O43189 AL162424.1-201ENST00000602325 221 ntBASIC1.31□□□□□ -2.2
PHF1O43189 AC022709.1-201ENST00000615967 87 ntBASIC1.31□□□□□ -2.2
PHF1O43189 snoU18.1-201ENST00000629629 71 ntBASIC1.31□□□□□ -2.2
PHF1O43189 AC068647.2-201ENST00000637380 353 ntBASIC1.31□□□□□ -2.2
PHF1O43189 AL442644.1-201ENST00000454390 3105 ntBASIC1.31□□□□□ -2.2
PHF1O43189 RNU6-1048P-201ENST00000364054 107 ntBASIC1.3□□□□□ -2.2
PHF1O43189 Y_RNA.447-201ENST00000384184 113 ntBASIC1.3□□□□□ -2.2
PHF1O43189 RNU6-440P-201ENST00000390882 105 ntBASIC1.3□□□□□ -2.2
PHF1O43189 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
PHF1O43189 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
PHF1O43189 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
PHF1O43189 snoU13.27-201ENST00000459278 104 ntBASIC1.3□□□□□ -2.2
PHF1O43189 AC117454.1-201ENST00000491120 168 ntBASIC1.3□□□□□ -2.2
PHF1O43189 OR9P1P-201ENST00000496431 281 ntBASIC1.3□□□□□ -2.2
PHF1O43189 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.3□□□□□ -2.2
PHF1O43189 RNU6-1291P-201ENST00000516591 104 ntBASIC1.3□□□□□ -2.2
PHF1O43189 RNU7-28P-201ENST00000516759 62 ntBASIC1.3□□□□□ -2.2
PHF1O43189 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
PHF1O43189 MIR4762-201ENST00000585261 75 ntBASIC1.3□□□□□ -2.2
PHF1O43189 POLR3GP1-201ENST00000594073 261 ntBASIC1.3□□□□□ -2.2
PHF1O43189 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.3□□□□□ -2.2
PHF1O43189 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PHF1O43189 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PHF1O43189 Y_RNA.117-201ENST00000363294 101 ntBASIC1.29□□□□□ -2.2
PHF1O43189 RNU4-13P-201ENST00000364019 141 ntBASIC1.29□□□□□ -2.2
PHF1O43189 U8.5-201ENST00000364528 136 ntBASIC1.29□□□□□ -2.2
PHF1O43189 Y_RNA.401-201ENST00000383965 117 ntBASIC1.29□□□□□ -2.2
PHF1O43189 RNU6-136P-201ENST00000384663 107 ntBASIC1.29□□□□□ -2.2
PHF1O43189 RNU6-1031P-201ENST00000384773 107 ntBASIC1.29□□□□□ -2.2
PHF1O43189 RNU6-651P-201ENST00000411040 105 ntBASIC1.29□□□□□ -2.2
PHF1O43189 BTF3P11-201ENST00000426582 477 ntBASIC1.29□□□□□ -2.2
PHF1O43189 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
PHF1O43189 MIR5688-201ENST00000580619 83 ntBASIC1.29□□□□□ -2.2
PHF1O43189 AL929325.1-201ENST00000603096 117 ntBASIC1.29□□□□□ -2.2
PHF1O43189 BX284668.6-201ENST00000606899 438 ntBASIC1.29□□□□□ -2.2
PHF1O43189 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
PHF1O43189 MIRLET7C-201ENST00000362160 84 ntBASIC1.28□□□□□ -2.2
PHF1O43189 Y_RNA.76-201ENST00000362931 109 ntBASIC1.28□□□□□ -2.2
PHF1O43189 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
PHF1O43189 Y_RNA.267-201ENST00000364679 109 ntBASIC1.28□□□□□ -2.2
PHF1O43189 RNU6-144P-201ENST00000383951 107 ntBASIC1.28□□□□□ -2.2
PHF1O43189 RNU6-211P-201ENST00000384047 107 ntBASIC1.28□□□□□ -2.2
PHF1O43189 RNU6-342P-201ENST00000384521 104 ntBASIC1.28□□□□□ -2.2
PHF1O43189 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
PHF1O43189 SNORA36B-201ENST00000410438 131 ntBASIC1.28□□□□□ -2.2
PHF1O43189 RN7SKP200-201ENST00000410564 320 ntBASIC1.28□□□□□ -2.2
PHF1O43189 Y_RNA.618-201ENST00000410949 107 ntBASIC1.28□□□□□ -2.2
PHF1O43189 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.28□□□□□ -2.2
PHF1O43189 AC100767.1-201ENST00000528178 123 ntBASIC1.28□□□□□ -2.2
PHF1O43189 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.28□□□□□ -2.2
PHF1O43189 MIR5692C2-201ENST00000577959 77 ntBASIC1.28□□□□□ -2.2
PHF1O43189 SNORA77B-201ENST00000578179 125 ntBASIC1.28□□□□□ -2.2
PHF1O43189 MIR3128-201ENST00000581957 66 ntBASIC1.28□□□□□ -2.2
PHF1O43189 AL021707.8-201ENST00000609428 183 ntBASIC1.28□□□□□ -2.2
PHF1O43189 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
PHF1O43189 AC021506.2-201ENST00000612354 169 ntBASIC1.28□□□□□ -2.2
PHF1O43189 PVT1_3.1-201ENST00000620853 95 ntBASIC1.28□□□□□ -2.2
PHF1O43189 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.28□□□□□ -2.2
PHF1O43189 Y_RNA.60-201ENST00000362831 98 ntBASIC1.27□□□□□ -2.21
PHF1O43189 Y_RNA.203-201ENST00000364106 102 ntBASIC1.27□□□□□ -2.21
PHF1O43189 RNU4-41P-201ENST00000364426 143 ntBASIC1.27□□□□□ -2.21
PHF1O43189 Y_RNA.304-201ENST00000365011 112 ntBASIC1.27□□□□□ -2.21
PHF1O43189 RNU6-439P-201ENST00000384188 106 ntBASIC1.27□□□□□ -2.21
PHF1O43189 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.27□□□□□ -2.21
PHF1O43189 MIR526A2-201ENST00000390198 65 ntBASIC1.27□□□□□ -2.21
PHF1O43189 RNA5SP482-201ENST00000391269 118 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 275.1 ms