Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
CLDN3O15551 AC138305.3-201ENST00000624988 240 ntBASIC0.54□□□□□ -2.32
CLDN3O15551 MIR1-1-201ENST00000362147 71 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 Y_RNA.341-201ENST00000365341 102 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 MT-TL1-201ENST00000386347 75 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 SNORD28B-201ENST00000390993 75 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 MIR1302-7-201ENST00000408841 72 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 MTCO3P10-201ENST00000455912 772 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 RNU7-116P-201ENST00000516940 62 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 RN7SKP295-201ENST00000517264 153 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 AC022306.2-201ENST00000617563 647 ntBASIC0.53□□□□□ -2.32
CLDN3O15551 Y_RNA.27-201ENST00000362540 103 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 RNU6-1175P-201ENST00000365200 107 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 RNU6-708P-201ENST00000384217 107 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 SNORD105-201ENST00000386910 85 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 MIR1827-201ENST00000408549 66 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 Y_RNA.653-201ENST00000459091 95 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 MIR2115-201ENST00000516657 100 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 AC091925.1-201ENST00000623204 462 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 U6.92-201ENST00000636464 89 ntBASIC0.52□□□□□ -2.33
CLDN3O15551 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CLDN3O15551 Y_RNA.310-201ENST00000365063 113 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CLDN3O15551 RNU6-442P-201ENST00000383968 104 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 MIR598-201ENST00000384868 97 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 MIR570-201ENST00000384917 97 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 MIR489-201ENST00000384923 84 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 RNU6-876P-201ENST00000391295 104 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 MTCO2P27-201ENST00000420740 428 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 AC096644.2-201ENST00000429278 159 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 AC005042.3-201ENST00000453230 174 ntBASIC0.51□□□□□ -2.33
CLDN3O15551 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CLDN3O15551 RNU6-490P-201ENST00000362985 107 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 Y_RNA.203-201ENST00000364106 102 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 Y_RNA.370-201ENST00000365589 108 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 Y_RNA.474-201ENST00000384341 102 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 Y_RNA.570-201ENST00000384750 101 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 AC099799.1-201ENST00000439809 192 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 RPL23AP54-201ENST00000495129 419 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 AC005730.3-201ENST00000583067 366 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 AC133104.2-201ENST00000615272 193 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
CLDN3O15551 RNU6-396P-201ENST00000365369 105 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 Y_RNA.456-201ENST00000384232 111 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 MIR559-201ENST00000385188 96 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 RNU6-613P-201ENST00000410412 108 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.49□□□□□ -2.33
CLDN3O15551 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.49□□□□□ -2.33
CLDN3O15551 AC091951.2-201ENST00000500762 203 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 RNU6-559P-201ENST00000516151 98 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 AC024405.2-202ENST00000532731 184 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 AC087685.1-201ENST00000587507 141 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 AC113139.1-201ENST00000605049 239 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 AC025253.1-201ENST00000613623 543 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 Pinc.1-201ENST00000616452 154 ntBASIC0.49□□□□□ -2.33
CLDN3O15551 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.49□□□□□ -2.33
CLDN3O15551 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
CLDN3O15551 SNORA51.10-201ENST00000384418 136 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AL590004.1-201ENST00000405321 300 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AC024067.1-201ENST00000426199 223 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.48□□□□□ -2.33
CLDN3O15551 RNU6-830P-201ENST00000516353 107 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.48□□□□□ -2.33
CLDN3O15551 AL355375.2-201ENST00000574825 175 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 MIR4423-201ENST00000580922 80 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.48□□□□□ -2.33
CLDN3O15551 VN1R91P-201ENST00000594377 169 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AC104695.3-201ENST00000604052 296 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 AP003357.1-201ENST00000604497 148 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CLDN3O15551 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.48□□□□□ -2.33
CLDN3O15551 Y_RNA.248-201ENST00000364501 109 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 Y_RNA.331-201ENST00000365267 102 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 U8.17-201ENST00000391292 132 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 SNRPGP14-201ENST00000435400 219 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.47□□□□□ -2.33
CLDN3O15551 RNU6-699P-201ENST00000517081 110 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 DEFB117-201ENST00000602356 141 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 AC092794.1-201ENST00000612734 582 ntBASIC0.47□□□□□ -2.33
CLDN3O15551 SNORD81.1-201ENST00000363064 77 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 RNU6-1209P-201ENST00000363655 107 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 U8.7-201ENST00000364940 136 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 AF228730.4-201ENST00000421457 183 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 HMGN1P10-201ENST00000474557 553 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 NDUFA4P2-201ENST00000489989 244 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 RNU7-115P-201ENST00000516433 55 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 AC006600.1-201ENST00000572529 153 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 U6atac.1-201ENST00000616025 117 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 AC010205.1-201ENST00000616668 449 ntBASIC0.46□□□□□ -2.34
CLDN3O15551 PVT1_3.1-201ENST00000620853 95 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms