Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-160P-201ENST00000384591 107 ntBASIC3□□□□□ -1.93
SOX1O00570 MIR548O-201ENST00000408583 114 ntBASIC3□□□□□ -1.93
SOX1O00570 CST2P1-201ENST00000425770 87 ntBASIC3□□□□□ -1.93
SOX1O00570 AC099677.2-201ENST00000436385 175 ntBASIC3□□□□□ -1.93
SOX1O00570 HMGN1P18-201ENST00000457642 277 ntBASIC3□□□□□ -1.93
SOX1O00570 AL163195.1-201ENST00000496941 348 ntBASIC3□□□□□ -1.93
SOX1O00570 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3□□□□□ -1.93
SOX1O00570 MIR4762-201ENST00000585261 75 ntBASIC3□□□□□ -1.93
SOX1O00570 AC009831.4-201ENST00000620744 325 ntBASIC3□□□□□ -1.93
SOX1O00570 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3□□□□□ -1.93
SOX1O00570 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3□□□□□ -1.93
SOX1O00570 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SOX1O00570 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SOX1O00570 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SOX1O00570 RNU6-766P-201ENST00000362478 107 ntBASIC2.99□□□□□ -1.93
SOX1O00570 Y_RNA.49-201ENST00000362714 112 ntBASIC2.99□□□□□ -1.93
SOX1O00570 SNORA33-201ENST00000363664 130 ntBASIC2.99□□□□□ -1.93
SOX1O00570 RNY4P6-201ENST00000363667 96 ntBASIC2.99□□□□□ -1.93
SOX1O00570 SNORD14E-201ENST00000364009 85 ntBASIC2.99□□□□□ -1.93
SOX1O00570 Y_RNA.198-201ENST00000364013 98 ntBASIC2.99□□□□□ -1.93
SOX1O00570 SNORA2.2-201ENST00000365473 135 ntBASIC2.99□□□□□ -1.93
SOX1O00570 Y_RNA.549-201ENST00000384657 102 ntBASIC2.99□□□□□ -1.93
SOX1O00570 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SOX1O00570 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX1O00570 RNU6-240P-201ENST00000516098 97 ntBASIC2.99□□□□□ -1.93
SOX1O00570 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX1O00570 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.99□□□□□ -1.93
SOX1O00570 SNORA50A-202ENST00000629536 136 ntBASIC2.99□□□□□ -1.93
SOX1O00570 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SOX1O00570 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX1O00570 Y_RNA.163-201ENST00000363702 113 ntBASIC2.98□□□□□ -1.93
SOX1O00570 SNORD115-28-201ENST00000363931 81 ntBASIC2.98□□□□□ -1.93
SOX1O00570 RNU6-756P-201ENST00000383997 107 ntBASIC2.98□□□□□ -1.93
SOX1O00570 RNU6-1072P-201ENST00000384703 107 ntBASIC2.98□□□□□ -1.93
SOX1O00570 RNU6-443P-201ENST00000384780 107 ntBASIC2.98□□□□□ -1.93
SOX1O00570 MIR759-201ENST00000390224 91 ntBASIC2.98□□□□□ -1.93
SOX1O00570 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SOX1O00570 SNORA26.7-201ENST00000391288 122 ntBASIC2.98□□□□□ -1.93
SOX1O00570 AC021205.2-201ENST00000480069 347 ntBASIC2.98□□□□□ -1.93
SOX1O00570 RNU6-1053P-201ENST00000515930 101 ntBASIC2.98□□□□□ -1.93
SOX1O00570 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX1O00570 AC007536.1-201ENST00000533382 349 ntBASIC2.98□□□□□ -1.93
SOX1O00570 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX1O00570 AL589743.1-201ENST00000551932 2712 ntBASIC2.98□□□□□ -1.93
SOX1O00570 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SOX1O00570 U8.5-201ENST00000364528 136 ntBASIC2.97□□□□□ -1.93
SOX1O00570 snoU2-30.1-201ENST00000365012 70 ntBASIC2.97□□□□□ -1.93
SOX1O00570 RNU7-70P-201ENST00000516941 66 ntBASIC2.97□□□□□ -1.93
SOX1O00570 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.97□□□□□ -1.93
SOX1O00570 AP000942.3-201ENST00000603702 160 ntBASIC2.97□□□□□ -1.93
SOX1O00570 RNU6-94P-201ENST00000607728 107 ntBASIC2.97□□□□□ -1.93
SOX1O00570 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
SOX1O00570 ZNF720P1-201ENST00000562403 1939 ntBASIC2.97□□□□□ -1.93
SOX1O00570 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SOX1O00570 Y_RNA.37-201ENST00000362606 108 ntBASIC2.96□□□□□ -1.94
SOX1O00570 RNU6-268P-201ENST00000364174 107 ntBASIC2.96□□□□□ -1.94
SOX1O00570 Y_RNA.328-201ENST00000365208 113 ntBASIC2.96□□□□□ -1.94
SOX1O00570 RNU6-690P-201ENST00000365242 106 ntBASIC2.96□□□□□ -1.94
SOX1O00570 RNU6-1014P-201ENST00000383940 103 ntBASIC2.96□□□□□ -1.94
SOX1O00570 SNORA51.5-201ENST00000384126 131 ntBASIC2.96□□□□□ -1.94
SOX1O00570 RNU6-1113P-201ENST00000384348 107 ntBASIC2.96□□□□□ -1.94
SOX1O00570 AL590004.2-201ENST00000404787 371 ntBASIC2.96□□□□□ -1.94
SOX1O00570 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
SOX1O00570 AC108729.3-201ENST00000513484 108 ntBASIC2.96□□□□□ -1.94
SOX1O00570 RNU7-25P-201ENST00000516544 62 ntBASIC2.96□□□□□ -1.94
SOX1O00570 MIR4498-201ENST00000577599 66 ntBASIC2.96□□□□□ -1.94
SOX1O00570 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.96□□□□□ -1.94
SOX1O00570 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.94
SOX1O00570 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX1O00570 RNU6-349P-201ENST00000362402 107 ntBASIC2.95□□□□□ -1.94
SOX1O00570 RNU6-862P-201ENST00000362804 105 ntBASIC2.95□□□□□ -1.94
SOX1O00570 Y_RNA.213-201ENST00000364178 111 ntBASIC2.95□□□□□ -1.94
SOX1O00570 Y_RNA.336-201ENST00000365307 109 ntBASIC2.95□□□□□ -1.94
SOX1O00570 Y_RNA.547-201ENST00000384654 119 ntBASIC2.95□□□□□ -1.94
SOX1O00570 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
SOX1O00570 RNA5SP482-201ENST00000391269 118 ntBASIC2.95□□□□□ -1.94
SOX1O00570 SNRPGP14-201ENST00000435400 219 ntBASIC2.95□□□□□ -1.94
SOX1O00570 AC009238.1-201ENST00000442165 424 ntBASIC2.95□□□□□ -1.94
SOX1O00570 AC009237.6-201ENST00000446969 424 ntBASIC2.95□□□□□ -1.94
SOX1O00570 RN7SL442P-201ENST00000473804 320 ntBASIC2.95□□□□□ -1.94
SOX1O00570 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX1O00570 SNORD45.4-201ENST00000516629 73 ntBASIC2.95□□□□□ -1.94
SOX1O00570 AP001318.4-201ENST00000616637 121 ntBASIC2.95□□□□□ -1.94
SOX1O00570 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SOX1O00570 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SOX1O00570 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SOX1O00570 SNORA63.5-201ENST00000363548 123 ntBASIC2.94□□□□□ -1.94
SOX1O00570 RNU6-461P-201ENST00000364195 107 ntBASIC2.94□□□□□ -1.94
SOX1O00570 Y_RNA.323-201ENST00000365157 109 ntBASIC2.94□□□□□ -1.94
SOX1O00570 Y_RNA.348-201ENST00000365403 103 ntBASIC2.94□□□□□ -1.94
SOX1O00570 RNU6-905P-201ENST00000384434 107 ntBASIC2.94□□□□□ -1.94
SOX1O00570 RPL21P3-201ENST00000395517 478 ntBASIC2.94□□□□□ -1.94
SOX1O00570 MIR1262-201ENST00000408276 93 ntBASIC2.94□□□□□ -1.94
SOX1O00570 RNA5SP281-201ENST00000516504 135 ntBASIC2.94□□□□□ -1.94
SOX1O00570 RNU7-28P-201ENST00000516759 62 ntBASIC2.94□□□□□ -1.94
SOX1O00570 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
SOX1O00570 MIR7153-201ENST00000637758 57 ntBASIC2.94□□□□□ -1.94
SOX1O00570 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SOX1O00570 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
SOX1O00570 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms