Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 MIR5094-201ENST00000578766 85 ntBASIC3.19□□□□□ -1.9
USP17L11C9JVI0 MIR3124-201ENST00000582636 67 ntBASIC3.19□□□□□ -1.9
USP17L11C9JVI0 AL121890.5-201ENST00000620848 304 ntBASIC3.19□□□□□ -1.9
USP17L11C9JVI0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP17L11C9JVI0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.19□□□□□ -1.9
USP17L11C9JVI0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP17L11C9JVI0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RNA5SP68-201ENST00000363885 119 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 SNORD115-28-201ENST00000363931 81 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RNU6-950P-201ENST00000384651 107 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RNY4P18-201ENST00000391107 89 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RNU11-3P-201ENST00000391111 133 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 AC007064.1-201ENST00000412238 351 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 AC003982.1-202ENST00000469928 248 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 SCARNA15-202ENST00000516881 127 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 AC108081.1-201ENST00000604358 221 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 AC025166.1-201ENST00000612411 163 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.18□□□□□ -1.9
USP17L11C9JVI0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP17L11C9JVI0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP17L11C9JVI0 MIRLET7F2-201ENST00000385277 83 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 RNA5SP465-201ENST00000391195 109 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 RNA5SP508-201ENST00000411327 119 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 SNRPGP14-201ENST00000435400 219 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.17□□□□□ -1.9
USP17L11C9JVI0 CYCTP-201ENST00000504253 315 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 PDCD5P2-201ENST00000507570 312 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 RNU6-589P-201ENST00000516485 107 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 ZNF861P-201ENST00000588126 639 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 MIR6817-201ENST00000615588 66 ntBASIC3.17□□□□□ -1.9
USP17L11C9JVI0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
USP17L11C9JVI0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP17L11C9JVI0 MIR597-201ENST00000384968 97 ntBASIC3.16□□□□□ -1.9
USP17L11C9JVI0 RN7SKP200-201ENST00000410564 320 ntBASIC3.16□□□□□ -1.9
USP17L11C9JVI0 AL445646.1-201ENST00000431784 216 ntBASIC3.16□□□□□ -1.9
USP17L11C9JVI0 AL513328.1-201ENST00000446460 224 ntBASIC3.16□□□□□ -1.9
USP17L11C9JVI0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.16□□□□□ -1.9
USP17L11C9JVI0 SNORA63.4-201ENST00000362763 126 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 SNORD38C-201ENST00000384381 69 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 RNU6-163P-201ENST00000384396 106 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 SNORD116-21-201ENST00000384507 92 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 Y_RNA.547-201ENST00000384654 119 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 AC004486.1-201ENST00000546846 233 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 AC015726.2-201ENST00000620112 122 ntBASIC3.15□□□□□ -1.91
USP17L11C9JVI0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
USP17L11C9JVI0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP17L11C9JVI0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP17L11C9JVI0 MIR26A1-201ENST00000362205 77 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 Y_RNA.37-201ENST00000362606 108 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 SNORA2.2-201ENST00000365473 135 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 AL034345.1-201ENST00000407768 123 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
USP17L11C9JVI0 RNA5SP148-201ENST00000516527 94 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 RNU7-70P-201ENST00000516941 66 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 MIR376A2-201ENST00000636782 80 ntBASIC3.14□□□□□ -1.91
USP17L11C9JVI0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP17L11C9JVI0 ICE2P2-201ENST00000483823 2787 ntBASIC3.13□□□□□ -1.91
USP17L11C9JVI0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP17L11C9JVI0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.13□□□□□ -1.91
USP17L11C9JVI0 AC027279.3-201ENST00000625055 122 ntBASIC3.13□□□□□ -1.91
USP17L11C9JVI0 RNU6-880P-201ENST00000384526 107 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP17L11C9JVI0 MIR1263-201ENST00000408324 86 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 MIR1283-2-201ENST00000408621 87 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 RNA5SP136-201ENST00000410906 107 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.12□□□□□ -1.91
USP17L11C9JVI0 AC087499.4-201ENST00000448505 178 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 AC114811.1-201ENST00000507207 168 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 MIR4658-201ENST00000584344 65 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.12□□□□□ -1.91
USP17L11C9JVI0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP17L11C9JVI0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP17L11C9JVI0 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 MTND5P18-201ENST00000445624 1801 ntBASIC3.12□□□□□ -1.91
USP17L11C9JVI0 RNU6-755P-201ENST00000364400 103 ntBASIC3.11□□□□□ -1.91
USP17L11C9JVI0 MIR518A2-201ENST00000384966 87 ntBASIC3.11□□□□□ -1.91
USP17L11C9JVI0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.11□□□□□ -1.91
USP17L11C9JVI0 SNORA31.10-201ENST00000516482 106 ntBASIC3.11□□□□□ -1.91
USP17L11C9JVI0 IGKV1-22-201ENST00000524313 326 ntBASIC3.11□□□□□ -1.91
USP17L11C9JVI0 AL137067.1-201ENST00000615933 120 ntBASIC3.11□□□□□ -1.91
USP17L11C9JVI0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USP17L11C9JVI0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
USP17L11C9JVI0 SNORA67.4-201ENST00000384688 142 ntBASIC3.1□□□□□ -1.91
USP17L11C9JVI0 HMGN2P3-201ENST00000433603 273 ntBASIC3.1□□□□□ -1.91
USP17L11C9JVI0 HMGN2P5-201ENST00000436882 273 ntBASIC3.1□□□□□ -1.91
USP17L11C9JVI0 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
USP17L11C9JVI0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.1□□□□□ -1.91
USP17L11C9JVI0 ZNF720P1-201ENST00000562403 1939 ntBASIC3.1□□□□□ -1.91
USP17L11C9JVI0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
USP17L11C9JVI0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
USP17L11C9JVI0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP17L11C9JVI0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP17L11C9JVI0 SNORA63D-201ENST00000364359 132 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms