Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SNORA11.4-201ENST00000408823 129 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 RPL39P25-201ENST00000449384 154 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 AC114811.1-201ENST00000507207 168 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 MIR4325-201ENST00000583049 90 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 MIR4276-201ENST00000584832 70 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
PCDHB11Q9Y5F2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 MIR302B-201ENST00000362188 73 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 Y_RNA.93-201ENST00000363066 109 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 RNY1P7-201ENST00000384743 110 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 MIR1912-201ENST00000410389 80 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 RPS3AP1-201ENST00000413190 320 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 STAG3L5P-204ENST00000443759 179 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 HSPE1P19-201ENST00000603327 295 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 AC022513.1-201ENST00000624512 117 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHB11Q9Y5F2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 RNU4-16P-201ENST00000364737 141 ntBASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 SNX2P2-201ENST00000424553 323 ntBASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 MALAT1.1-201ENST00000618249 95 ntBASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 MIR8054-201ENST00000620877 86 ntBASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 SNORA50A-202ENST00000629536 136 ntBASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PCDHB11Q9Y5F2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 SNORA27-201ENST00000384323 126 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6-163P-201ENST00000384396 106 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6-816P-201ENST00000390914 107 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6-1268P-201ENST00000391214 107 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6-1239P-201ENST00000391310 107 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 AL035398.1-201ENST00000430869 322 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 RNU7-6P-201ENST00000516845 62 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 MIR4298-201ENST00000584380 73 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 SNORD115-40-201ENST00000606510 82 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 SNORA28-201ENST00000606769 126 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 AC027279.3-201ENST00000625055 122 ntBASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB11Q9Y5F2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 MIRLET7C-201ENST00000362160 84 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 MIR342-201ENST00000362212 99 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 Y_RNA.107-201ENST00000363190 121 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 SNORA63D-201ENST00000364359 132 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 RN7SKP200-201ENST00000410564 320 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 COTL1P1-201ENST00000422309 375 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6-1116P-201ENST00000517269 99 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 AC062037.1-201ENST00000605302 128 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 AL449363.1-201ENST00000617815 186 ntBASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PCDHB11Q9Y5F2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 AL442644.1-201ENST00000454390 3105 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RNU4-36P-201ENST00000364294 144 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 Y_RNA.241-201ENST00000364470 117 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RNA5SP144-201ENST00000410846 116 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RNU4-47P-201ENST00000410876 114 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 AL445687.1-201ENST00000439946 251 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RNU7-96P-201ENST00000459535 64 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6-998P-201ENST00000515894 101 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 DEFB131E-201ENST00000532329 154 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 AC026271.5-201ENST00000577873 130 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 MIR5004-201ENST00000579078 107 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 AC005786.1-201ENST00000588553 154 ntBASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHB11Q9Y5F2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 RNA5SP374-201ENST00000362939 125 ntBASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms