Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.31□□□□□ -2.36
TREX1Q9NSU2 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 AL392103.1-201ENST00000447000 198 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 MTND3P10-201ENST00000450967 341 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 RPL17P19-201ENST00000489069 552 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 AC093534.1-201ENST00000504977 132 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 MIR2355-201ENST00000517199 87 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 MIR548AR-201ENST00000582191 57 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 AC005899.2-201ENST00000584353 90 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 AC018638.8-201ENST00000588755 281 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 AC048344.4-201ENST00000619744 527 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 AC091925.1-201ENST00000623204 462 ntBASIC0.31□□□□□ -2.36
TREX1Q9NSU2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.31□□□□□ -2.36
TREX1Q9NSU2 Y_RNA.101-201ENST00000363154 102 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 RNU6-99P-201ENST00000364721 107 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 Y_RNA.404-201ENST00000383978 102 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 RNU6-510P-201ENST00000391239 108 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 MIR548K-201ENST00000408406 116 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 MIR1302-7-201ENST00000408841 72 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 AC107399.1-201ENST00000451226 265 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 AC105313.1-201ENST00000509121 353 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.3□□□□□ -2.36
TREX1Q9NSU2 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 RNA5SP330-201ENST00000517096 96 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 AC104695.3-201ENST00000604052 296 ntBASIC0.3□□□□□ -2.36
TREX1Q9NSU2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
TREX1Q9NSU2 SNORD14E-201ENST00000364009 85 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 MIR570-201ENST00000384917 97 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 SNORD28B-201ENST00000390993 75 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 RNU2-54P-201ENST00000410299 190 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 MTND4P28-201ENST00000426217 387 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 CHEK2P4-201ENST00000450340 246 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 U8.19-201ENST00000459095 133 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 RNU6-155P-201ENST00000516347 100 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 MIR2115-201ENST00000516657 100 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 RNU6-307P-201ENST00000516743 106 ntBASIC0.29□□□□□ -2.36
TREX1Q9NSU2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.29□□□□□ -2.36
TREX1Q9NSU2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 RNU6-767P-201ENST00000384132 107 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 SNORA72-201ENST00000384339 132 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 SNORD38C-201ENST00000384381 69 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 MIR802-201ENST00000390235 94 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 SNORD115-47-201ENST00000391226 86 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 RNU2-61P-201ENST00000411069 191 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 AC005176.2-201ENST00000596933 147 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 AC240442.1-201ENST00000616055 283 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 AL109933.3-201ENST00000619095 188 ntBASIC0.28□□□□□ -2.36
TREX1Q9NSU2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.86-201ENST00000363020 111 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 RNU6-396P-201ENST00000365369 105 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.482-201ENST00000384377 111 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 SNORA69.1-201ENST00000390904 137 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 RNU6-613P-201ENST00000410412 108 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.27□□□□□ -2.37
TREX1Q9NSU2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.27□□□□□ -2.37
TREX1Q9NSU2 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
TREX1Q9NSU2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.27□□□□□ -2.37
TREX1Q9NSU2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.27□□□□□ -2.37
TREX1Q9NSU2 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RNU6-626P-201ENST00000363354 107 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.251-201ENST00000364551 99 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RNU4-24P-201ENST00000364565 139 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RNU6-716P-201ENST00000365621 103 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RNU6-20P-201ENST00000384106 107 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RNU6-192P-201ENST00000391253 100 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 SNORA75.4-201ENST00000391278 119 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 MTCO2P27-201ENST00000420740 428 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
TREX1Q9NSU2 FCF1P4-201ENST00000448326 183 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RPS29P25-201ENST00000481709 171 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 RNU6-436P-201ENST00000516171 114 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.26□□□□□ -2.37
TREX1Q9NSU2 AL355375.2-201ENST00000574825 175 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
TREX1Q9NSU2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
TREX1Q9NSU2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.25□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.168-201ENST00000363740 102 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.446-201ENST00000384178 104 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 MIR520F-201ENST00000384824 87 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 MIR573-201ENST00000384964 99 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 MIR520H-201ENST00000385126 88 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 RNU2-70P-201ENST00000410718 179 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 RNU6-177P-201ENST00000411257 104 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 MTND3P8-201ENST00000412909 339 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 AC011352.1-201ENST00000512300 793 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 RNU6-977P-201ENST00000516411 103 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 MIR3688-2-201ENST00000636963 87 ntBASIC0.25□□□□□ -2.37
TREX1Q9NSU2 RNA5SP257-201ENST00000363023 116 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.88-201ENST00000363029 99 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.370-201ENST00000365589 108 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.436-201ENST00000384097 102 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 SNORA51.10-201ENST00000384418 136 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms