Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
PCDH11XQ9BZA7 AC023827.1-201ENST00000569247 97 ntBASIC0.46□□□□□ -2.34
PCDH11XQ9BZA7 AC090517.2-201ENST00000614966 680 ntBASIC0.46□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.3-201ENST00000362331 103 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.390-201ENST00000383932 102 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 MIR516B2-201ENST00000385190 85 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 AL031003.1-201ENST00000404229 172 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 SNORD99-201ENST00000408612 74 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 RNU2-54P-201ENST00000410299 190 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 RNU2-61P-201ENST00000411069 191 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 MTND4P28-201ENST00000426217 387 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 MTND3P10-201ENST00000450967 341 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 RPL7P42-201ENST00000481005 679 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 SNORA18.7-201ENST00000516910 131 ntBASIC0.45□□□□□ -2.34
PCDH11XQ9BZA7 SNORA25.3-201ENST00000363205 127 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.404-201ENST00000383978 102 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 SNORD115-47-201ENST00000391226 86 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 RNU4-54P-201ENST00000516428 129 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 AF235103.2-201ENST00000525753 346 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 AC240442.1-201ENST00000616055 283 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 AC002553.4-201ENST00000616896 331 ntBASIC0.44□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.86-201ENST00000363020 111 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-961P-201ENST00000363893 105 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-1297P-201ENST00000384415 104 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 SNORA69.1-201ENST00000390904 137 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MIR1277-201ENST00000408536 78 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MTATP6P26-201ENST00000445926 662 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 FCF1P4-201ENST00000448326 183 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 SNORD123-201ENST00000459473 70 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 SNORA25.10-201ENST00000515926 124 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 AC005972.2-201ENST00000604690 348 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MIR1244-1-201ENST00000612829 85 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 7SK.10-201ENST00000621414 298 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 AC067863.3-201ENST00000624172 122 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MIR1244-3-201ENST00000635744 85 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MIR1244-2-201ENST00000636449 85 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 MIR1244-4-202ENST00000636813 85 ntBASIC0.43□□□□□ -2.34
PCDH11XQ9BZA7 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 SNORA72-201ENST00000384339 132 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.516-201ENST00000384541 124 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.577-201ENST00000384794 101 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-131P-201ENST00000391144 107 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 SNORA75.4-201ENST00000391278 119 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 AL392103.1-201ENST00000447000 198 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 TRBVB-201ENST00000477100 408 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 MIR6759-201ENST00000638110 65 ntBASIC0.42□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.72-201ENST00000362894 103 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.88-201ENST00000363029 99 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 MIR329-2-201ENST00000385029 84 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 RNU1-119P-201ENST00000391122 165 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 MIR1265-201ENST00000408444 86 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 MLLT10P1-201ENST00000418346 262 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 AC016907.1-201ENST00000419483 435 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 CHEK2P4-201ENST00000450340 246 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 AC011352.1-201ENST00000512300 793 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.41□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.101-201ENST00000363154 102 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-99P-201ENST00000364721 107 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 SNORD50B-201ENST00000364995 70 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 Y_RNA.592-201ENST00000410274 109 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 RNU6-994P-201ENST00000410507 111 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AC055872.1-201ENST00000570978 278 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AC005176.2-201ENST00000596933 147 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AL627230.5-201ENST00000619807 58 ntBASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
PCDH11XQ9BZA7 AC134026.1-201ENST00000623249 2239 ntBASIC0.4□□□□□ -2.35
PCDH11XQ9BZA7 RNY3P4-201ENST00000384428 101 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 MIR1827-201ENST00000408549 66 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1156P-201ENST00000410365 100 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 AC244098.3-201ENST00000424803 96 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 SNRPGP10-201ENST00000432323 225 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-436P-201ENST00000516171 114 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-264P-201ENST00000517134 104 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 AC144568.1-201ENST00000520139 137 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 AC093027.1-201ENST00000546698 429 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 AC104695.3-201ENST00000604052 296 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 RBM11P1-201ENST00000604951 799 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms