Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 SNORA27.4-201ENST00000516650 95 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 AC062037.2-201ENST00000610137 73 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 AL353770.2-201ENST00000620024 78 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 AC018630.2-201ENST00000534866 2403 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 RNU6-801P-201ENST00000364087 105 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 SNORD114-22-201ENST00000365423 72 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.456-201ENST00000384232 111 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 RNU6-662P-201ENST00000384253 104 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AL162725.1-201ENST00000435405 301 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 HSPE1P9-201ENST00000440046 311 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 MTND4LP30-201ENST00000454092 297 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AC091021.1-201ENST00000468051 388 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AC136628.3-201ENST00000521868 290 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AC091178.2-201ENST00000584401 117 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AC004832.4-201ENST00000608952 331 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 MIR6079-201ENST00000635807 62 ntBASIC1.6□□□□□ -2.15
RTP3Q9BQQ7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 RNU2-14P-201ENST00000411053 191 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 AC004817.2-201ENST00000561794 651 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 AC005972.2-201ENST00000604690 348 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 AC068647.2-201ENST00000637380 353 ntBASIC1.59□□□□□ -2.15
RTP3Q9BQQ7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.16
RTP3Q9BQQ7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.44-201ENST00000362676 108 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 RNU6-360P-201ENST00000390944 104 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 AC245047.3-201ENST00000429428 127 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 RPL39P38-201ENST00000467018 153 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 SNORA31.10-201ENST00000516482 106 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 RNA5SP481-201ENST00000516814 122 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 AC134026.1-201ENST00000623249 2239 ntBASIC1.58□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.54-201ENST00000362766 105 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.117-201ENST00000363294 101 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 RNU6-740P-201ENST00000364734 105 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 U8.7-201ENST00000364940 136 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 RNU6-439P-201ENST00000384188 106 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.477-201ENST00000384352 108 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 RNU6-763P-201ENST00000390865 106 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 SNORA26.5-201ENST00000391215 123 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 RNU11-5P-201ENST00000391216 129 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 AL603910.2-201ENST00000407268 136 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 AC233266.1-201ENST00000454518 96 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 U8.19-201ENST00000459095 133 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.637-201ENST00000459424 114 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 AC117454.1-201ENST00000491120 168 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 AC242852.1-201ENST00000612151 96 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 U2.14-201ENST00000615943 113 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 MIR8054-201ENST00000620877 86 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 AC244015.1-201ENST00000622301 99 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 snoU18.1-201ENST00000629629 71 ntBASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RTP3Q9BQQ7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 UBE2WP1-201ENST00000362030 340 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.217-201ENST00000364214 105 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.275-201ENST00000364726 110 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.277-201ENST00000364754 102 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.307-201ENST00000365022 117 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 SNORA72.4-201ENST00000384174 132 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1289P-201ENST00000384431 106 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.562-201ENST00000384695 113 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 RNU6-440P-201ENST00000390882 105 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 MTCO2P33-201ENST00000402100 465 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 RNU6-651P-201ENST00000411040 105 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 snoU13.27-201ENST00000459278 104 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.641-201ENST00000459414 105 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 MTND1P19-201ENST00000511780 315 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 MIR3128-201ENST00000581957 66 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 POLR3GP1-201ENST00000594073 261 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 AL929325.1-201ENST00000603096 117 ntBASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RTP3Q9BQQ7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms