Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SNRPGP14-201ENST00000435400 219 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 MTCO2P3-201ENST00000442543 421 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 RNA5SP484-201ENST00000458857 111 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AC091179.3-201ENST00000474761 144 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 SNORA25.14-201ENST00000516481 132 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 RNU6-175P-201ENST00000516896 107 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 MTND4LP25-201ENST00000570218 163 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AC090616.2-202ENST00000584248 222 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AC121334.2-201ENST00000605387 271 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AC026741.1-201ENST00000605892 482 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 MIR8055-201ENST00000610739 97 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AL049777.1-201ENST00000622740 518 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 AP002371.2-201ENST00000624450 503 ntBASIC-1.73□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 RNU6-865P-201ENST00000364772 107 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 RNU6-784P-201ENST00000384330 106 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 MTCYBP36-201ENST00000404146 440 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 AL008987.1-201ENST00000415528 237 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 AC073648.5-201ENST00000603502 305 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 MIR198-201ENST00000637333 62 ntBASIC-1.74□□□□□ -2.69
GAFA1Q96PS6 SNORD14E-201ENST00000364009 85 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 RNU6-431P-201ENST00000383874 107 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 RNU6-224P-201ENST00000384055 107 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 SNORD64-201ENST00000386683 67 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 MTCYBP4-201ENST00000401524 249 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 SNX3P1X-201ENST00000414887 175 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 AC022137.1-201ENST00000483735 151 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 SNORA25.10-201ENST00000515926 124 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 AC024405.2-202ENST00000532731 184 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 AC002044.1-201ENST00000606707 158 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 AL391834.2-201ENST00000609982 546 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.75□□□□□ -2.69
GAFA1Q96PS6 RNU6-179P-201ENST00000363350 107 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 SNORD115-7-201ENST00000365306 82 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 RNU6-602P-201ENST00000411155 105 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 MTATP6P18-201ENST00000417994 673 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 RNU6-437P-201ENST00000459408 95 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 SNORD22.1-201ENST00000516331 125 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 RNA5SP33-201ENST00000516687 98 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 MIR4491-201ENST00000581087 68 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 RNU6-88P-201ENST00000606801 100 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 AC011373.1-201ENST00000607270 237 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 AL136370.1-201ENST00000608166 691 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 MIR382-201ENST00000637119 76 ntBASIC-1.76□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 SNORA63.5-201ENST00000363548 123 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 RNU6-468P-201ENST00000384003 109 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 RNU6-883P-201ENST00000384597 107 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 MIR181B2-201ENST00000385004 89 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 MIR147A-201ENST00000385079 72 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 SNORD12C-201ENST00000386307 89 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 SNORA40.2-201ENST00000390847 128 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 RNU6-550P-201ENST00000391057 101 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 RNA5SP118-201ENST00000410385 109 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 USP9YP12-201ENST00000450481 570 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 RNU7-104P-201ENST00000459398 79 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 AC022616.6-201ENST00000520479 119 ntBASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.77□□□□□ -2.69
GAFA1Q96PS6 RNU6-723P-201ENST00000383973 107 ntBASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 AC073464.1-201ENST00000429823 534 ntBASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 MTND1P35-201ENST00000526739 508 ntBASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 MIR3115-201ENST00000577915 68 ntBASIC-1.78□□□□□ -2.69
GAFA1Q96PS6 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 RNU6-509P-201ENST00000363519 107 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 RNU4-1-201ENST00000363925 141 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 RNU6-266P-201ENST00000364225 107 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 MIR539-201ENST00000365690 78 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 U8.15-201ENST00000390947 134 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 RNA5SP475-201ENST00000410568 110 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 AC096949.1-201ENST00000412047 152 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 MTND3P9-201ENST00000429526 346 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 AC093023.1-201ENST00000547375 507 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.79□□□□□ -2.7
GAFA1Q96PS6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 SNORD115-2-201ENST00000362842 82 ntBASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 RNA5SP403-201ENST00000363598 108 ntBASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 SNORA72.6-201ENST00000384520 129 ntBASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 RNU6-913P-201ENST00000390913 95 ntBASIC-1.8□□□□□ -2.7
GAFA1Q96PS6 AC137499.1-201ENST00000427602 88 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms