Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXC13P31276 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 MIR4753-201ENST00000585119 83 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 AC022441.3-201ENST00000605737 136 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXC13P31276 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
HOXC13P31276 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXC13P31276 Y_RNA.7-201ENST00000362352 102 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 RNU6-873P-201ENST00000363833 107 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 Y_RNA.182-201ENST00000363880 111 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 Y_RNA.357-201ENST00000365487 109 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 Y_RNA.412-201ENST00000384001 104 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 FTH1P12-201ENST00000432137 551 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 AC005042.3-201ENST00000453230 174 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXC13P31276 RNU6-970P-201ENST00000516312 107 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC13P31276 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXC13P31276 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC13P31276 MIR5692C2-201ENST00000577959 77 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 MIR4422-201ENST00000581938 83 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXC13P31276 DEFB117-201ENST00000602356 141 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 AL008718.3-201ENST00000610217 321 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 AC004467.1-201ENST00000615678 330 ntBASIC1.86□□□□□ -2.11
HOXC13P31276 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC13P31276 MIR126-201ENST00000362291 85 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 Y_RNA.498-201ENST00000384460 102 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 Y_RNA.508-201ENST00000384502 114 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 SNORA20-201ENST00000384662 132 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HOXC13P31276 MIR1283-1-201ENST00000408494 87 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 RNU6-257P-201ENST00000410238 98 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 RNU6-625P-201ENST00000459412 107 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 AC010531.2-201ENST00000465012 153 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 TRMT112P2-201ENST00000512910 132 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 RNU6-155P-201ENST00000516347 100 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 DEFB131C-201ENST00000528817 165 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 AC018448.1-201ENST00000552843 316 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC13P31276 AC010999.1-201ENST00000611856 324 ntBASIC1.85□□□□□ -2.11
HOXC13P31276 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC13P31276 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HOXC13P31276 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.85□□□□□ -2.11
HOXC13P31276 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC13P31276 MTND5P35-201ENST00000557537 1720 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNU6-727P-201ENST00000363592 107 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNU4-84P-201ENST00000364200 139 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNU6-418P-201ENST00000384035 107 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNU6-44P-201ENST00000384045 107 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 MIR489-201ENST00000384923 84 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 MIR569-201ENST00000385228 96 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 Y_RNA.629-201ENST00000411368 105 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNA5SP445-201ENST00000515889 115 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNU6-948P-201ENST00000516374 107 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 RNU6-1198P-201ENST00000516904 67 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 MIR5094-201ENST00000578766 85 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 AL359821.1-201ENST00000605519 182 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 Y_RNA.778-201ENST00000620203 90 ntBASIC1.84□□□□□ -2.11
HOXC13P31276 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC13P31276 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNU6-1272P-201ENST00000362776 107 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNU6-137P-201ENST00000363680 108 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNU6-414P-201ENST00000363705 104 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 Y_RNA.179-201ENST00000363844 90 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNU6-312P-201ENST00000364629 107 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNU6-1199P-201ENST00000411249 104 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 ATP5J2P3-201ENST00000451550 258 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 U8.19-201ENST00000459095 133 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 AC114982.1-201ENST00000469402 321 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 SNORA25.12-201ENST00000516202 82 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNU6-971P-201ENST00000516920 106 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 RNA5SP54-201ENST00000516951 92 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 MIR3684-201ENST00000579779 74 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 AL391516.1-201ENST00000554380 2449 ntBASIC1.83□□□□□ -2.12
HOXC13P31276 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC13P31276 AC010332.2-201ENST00000613083 1904 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 Y_RNA.23-201ENST00000362496 106 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 SNORD115-8-201ENST00000363856 82 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 SNORD115-38-201ENST00000365037 82 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 Y_RNA.329-201ENST00000365209 107 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 Y_RNA.353-201ENST00000365440 108 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 RNU4-17P-201ENST00000365598 141 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC13P31276 RAB28P5-201ENST00000427490 651 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 AC008267.6-201ENST00000441664 139 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 AC074290.1-201ENST00000448883 135 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 RPS20P10-201ENST00000451209 253 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 Y_RNA.637-201ENST00000459424 114 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 AC010409.1-201ENST00000487382 476 ntBASIC1.82□□□□□ -2.12
HOXC13P31276 Y_RNA.797-201ENST00000515977 94 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms