Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RN7SKP132-201ENST00000516001 208 ntBASIC4.44□□□□□ -1.7
CHGAP10645 MIR3683-201ENST00000580847 82 ntBASIC4.44□□□□□ -1.7
CHGAP10645 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.44□□□□□ -1.7
CHGAP10645 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHGAP10645 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHGAP10645 MT-TI-201ENST00000387365 69 ntBASIC4.43□□□□□ -1.7
CHGAP10645 AL627390.1-201ENST00000396055 340 ntBASIC4.43□□□□□ -1.7
CHGAP10645 AC084364.2-201ENST00000546924 395 ntBASIC4.43□□□□□ -1.7
CHGAP10645 MIR3163-201ENST00000581592 73 ntBASIC4.43□□□□□ -1.7
CHGAP10645 MIR4305-201ENST00000583252 102 ntBASIC4.43□□□□□ -1.7
CHGAP10645 AL449363.1-201ENST00000617815 186 ntBASIC4.43□□□□□ -1.7
CHGAP10645 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.43□□□□□ -1.7
CHGAP10645 MIR548D2-201ENST00000384955 97 ntBASIC4.42□□□□□ -1.7
CHGAP10645 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.42□□□□□ -1.7
CHGAP10645 RNA5SP367-201ENST00000516557 118 ntBASIC4.42□□□□□ -1.7
CHGAP10645 AC015726.2-201ENST00000620112 122 ntBASIC4.42□□□□□ -1.7
CHGAP10645 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHGAP10645 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHGAP10645 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHGAP10645 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHGAP10645 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHGAP10645 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHGAP10645 MIR30E-201ENST00000362104 92 ntBASIC4.41□□□□□ -1.7
CHGAP10645 SNORA11.4-201ENST00000408823 129 ntBASIC4.41□□□□□ -1.7
CHGAP10645 RNU7-123P-201ENST00000515911 60 ntBASIC4.41□□□□□ -1.7
CHGAP10645 RNU6-158P-201ENST00000517104 100 ntBASIC4.41□□□□□ -1.7
CHGAP10645 MIR3169-201ENST00000578032 83 ntBASIC4.41□□□□□ -1.7
CHGAP10645 MIR5047-201ENST00000579212 100 ntBASIC4.41□□□□□ -1.7
CHGAP10645 PWAR6-201ENST00000552334 4618 ntBASIC4.41□□□□□ -1.7
CHGAP10645 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CHGAP10645 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.4□□□□□ -1.7
CHGAP10645 Y_RNA.344-201ENST00000365381 112 ntBASIC4.4□□□□□ -1.71
CHGAP10645 RNU6-49P-201ENST00000384256 107 ntBASIC4.4□□□□□ -1.71
CHGAP10645 SNORD38C-201ENST00000384381 69 ntBASIC4.4□□□□□ -1.71
CHGAP10645 MIR590-201ENST00000385008 97 ntBASIC4.4□□□□□ -1.71
CHGAP10645 MIR1261-201ENST00000408659 82 ntBASIC4.4□□□□□ -1.71
CHGAP10645 AC091932.4-201ENST00000623386 200 ntBASIC4.4□□□□□ -1.71
CHGAP10645 MIR2052-201ENST00000636055 55 ntBASIC4.4□□□□□ -1.71
CHGAP10645 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CHGAP10645 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHGAP10645 MIR423-201ENST00000362201 94 ntBASIC4.39□□□□□ -1.71
CHGAP10645 Z98941.1-201ENST00000407764 100 ntBASIC4.39□□□□□ -1.71
CHGAP10645 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.39□□□□□ -1.71
CHGAP10645 MIR4319-201ENST00000577285 85 ntBASIC4.39□□□□□ -1.71
CHGAP10645 ELOCP29-201ENST00000588193 334 ntBASIC4.39□□□□□ -1.71
CHGAP10645 AC244205.2-202ENST00000635781 342 ntBASIC4.39□□□□□ -1.71
CHGAP10645 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.38□□□□□ -1.71
CHGAP10645 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHGAP10645 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHGAP10645 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHGAP10645 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHGAP10645 RNU6-23P-201ENST00000363283 107 ntBASIC4.38□□□□□ -1.71
CHGAP10645 AL606517.2-201ENST00000442855 241 ntBASIC4.38□□□□□ -1.71
CHGAP10645 AC108938.1-201ENST00000451204 136 ntBASIC4.38□□□□□ -1.71
CHGAP10645 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.38□□□□□ -1.71
CHGAP10645 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.38□□□□□ -1.71
CHGAP10645 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHGAP10645 AL596211.1-201ENST00000569873 2277 ntBASIC4.37□□□□□ -1.71
CHGAP10645 RNU6-1104P-201ENST00000384723 104 ntBASIC4.37□□□□□ -1.71
CHGAP10645 SNORA26.2-201ENST00000390922 122 ntBASIC4.37□□□□□ -1.71
CHGAP10645 RHEBP3-201ENST00000411920 351 ntBASIC4.37□□□□□ -1.71
CHGAP10645 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.37□□□□□ -1.71
CHGAP10645 SNORA28-201ENST00000606769 126 ntBASIC4.37□□□□□ -1.71
CHGAP10645 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.37□□□□□ -1.71
CHGAP10645 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.37□□□□□ -1.71
CHGAP10645 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHGAP10645 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHGAP10645 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHGAP10645 AC008264.2-201ENST00000610193 3731 ntBASIC4.36□□□□□ -1.71
CHGAP10645 AC245060.5-201ENST00000610778 3293 ntBASIC4.36□□□□□ -1.71
CHGAP10645 AC105272.1-201ENST00000438604 198 ntBASIC4.36□□□□□ -1.71
CHGAP10645 RNU6-109P-201ENST00000516364 107 ntBASIC4.36□□□□□ -1.71
CHGAP10645 RNU6-184P-201ENST00000516514 107 ntBASIC4.36□□□□□ -1.71
CHGAP10645 AC026271.5-201ENST00000577873 130 ntBASIC4.36□□□□□ -1.71
CHGAP10645 MIR3162-201ENST00000581818 82 ntBASIC4.36□□□□□ -1.71
CHGAP10645 AC078899.2-201ENST00000595282 212 ntBASIC4.36□□□□□ -1.71
CHGAP10645 AL162726.3-218ENST00000636401 95 ntBASIC4.36□□□□□ -1.71
CHGAP10645 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CHGAP10645 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHGAP10645 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHGAP10645 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHGAP10645 RNY4P29-201ENST00000410801 97 ntBASIC4.35□□□□□ -1.71
CHGAP10645 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.35□□□□□ -1.71
CHGAP10645 RNU6-904P-201ENST00000516206 101 ntBASIC4.35□□□□□ -1.71
CHGAP10645 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHGAP10645 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHGAP10645 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.34□□□□□ -1.71
CHGAP10645 RNA5SP109-201ENST00000391010 116 ntBASIC4.34□□□□□ -1.71
CHGAP10645 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.34□□□□□ -1.71
CHGAP10645 AC114811.1-201ENST00000507207 168 ntBASIC4.34□□□□□ -1.71
CHGAP10645 AC141557.1-201ENST00000540982 400 ntBASIC4.34□□□□□ -1.71
CHGAP10645 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CHGAP10645 AC022523.2-201ENST00000561045 150 ntBASIC4.34□□□□□ -1.71
CHGAP10645 MIR4644-201ENST00000579929 84 ntBASIC4.34□□□□□ -1.71
CHGAP10645 AC002984.1-201ENST00000591692 448 ntBASIC4.34□□□□□ -1.71
CHGAP10645 MIR8054-201ENST00000620877 86 ntBASIC4.34□□□□□ -1.71
CHGAP10645 AC027279.3-201ENST00000625055 122 ntBASIC4.34□□□□□ -1.71
CHGAP10645 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.34□□□□□ -1.71
CHGAP10645 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CHGAP10645 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms