Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.16□□□□□ -1.9
NEFMP07197 AC245884.12-201ENST00000615364 59 ntBASIC3.16□□□□□ -1.9
NEFMP07197 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.16□□□□□ -1.9
NEFMP07197 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
NEFMP07197 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEFMP07197 Y_RNA.91-201ENST00000363042 107 ntBASIC3.15□□□□□ -1.91
NEFMP07197 Y_RNA.114-201ENST00000363265 113 ntBASIC3.15□□□□□ -1.91
NEFMP07197 RNU6-1209P-201ENST00000363655 107 ntBASIC3.15□□□□□ -1.91
NEFMP07197 RNU6-647P-201ENST00000364243 107 ntBASIC3.15□□□□□ -1.91
NEFMP07197 SNORA67.4-201ENST00000384688 142 ntBASIC3.15□□□□□ -1.91
NEFMP07197 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NEFMP07197 SNORA40.5-201ENST00000391061 128 ntBASIC3.15□□□□□ -1.91
NEFMP07197 MLLT10P1-201ENST00000418346 262 ntBASIC3.15□□□□□ -1.91
NEFMP07197 MTCO1P44-201ENST00000441935 243 ntBASIC3.15□□□□□ -1.91
NEFMP07197 OR9P1P-201ENST00000496431 281 ntBASIC3.15□□□□□ -1.91
NEFMP07197 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.15□□□□□ -1.91
NEFMP07197 Y_RNA.690-201ENST00000516603 95 ntBASIC3.15□□□□□ -1.91
NEFMP07197 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.15□□□□□ -1.91
NEFMP07197 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.15□□□□□ -1.91
NEFMP07197 AL670379.3-201ENST00000605040 251 ntBASIC3.15□□□□□ -1.91
NEFMP07197 AC103810.6-201ENST00000606708 136 ntBASIC3.15□□□□□ -1.91
NEFMP07197 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.15□□□□□ -1.91
NEFMP07197 JPX_2.1-201ENST00000614161 69 ntBASIC3.15□□□□□ -1.91
NEFMP07197 MIR203B-201ENST00000636080 86 ntBASIC3.15□□□□□ -1.91
NEFMP07197 MIR520G-201ENST00000385064 90 ntBASIC3.14□□□□□ -1.91
NEFMP07197 RNU11-5P-201ENST00000391216 129 ntBASIC3.14□□□□□ -1.91
NEFMP07197 MIR1253-201ENST00000408273 105 ntBASIC3.14□□□□□ -1.91
NEFMP07197 RNU4-53P-201ENST00000410828 140 ntBASIC3.14□□□□□ -1.91
NEFMP07197 CYP2C59P-201ENST00000457790 269 ntBASIC3.14□□□□□ -1.91
NEFMP07197 AC008413.1-201ENST00000511864 177 ntBASIC3.14□□□□□ -1.91
NEFMP07197 RNU6-1061P-201ENST00000516530 99 ntBASIC3.14□□□□□ -1.91
NEFMP07197 RNU7-149P-201ENST00000516739 59 ntBASIC3.14□□□□□ -1.91
NEFMP07197 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.14□□□□□ -1.91
NEFMP07197 AC016717.2-201ENST00000609089 5141 ntBASIC3.14□□□□□ -1.91
NEFMP07197 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEFMP07197 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEFMP07197 RNU6-220P-201ENST00000390919 107 ntBASIC3.13□□□□□ -1.91
NEFMP07197 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.13□□□□□ -1.91
NEFMP07197 RNU6-856P-201ENST00000516959 98 ntBASIC3.13□□□□□ -1.91
NEFMP07197 MIR3199-1-201ENST00000582434 88 ntBASIC3.13□□□□□ -1.91
NEFMP07197 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.13□□□□□ -1.91
NEFMP07197 Pinc.1-201ENST00000616452 154 ntBASIC3.13□□□□□ -1.91
NEFMP07197 AL590808.1-201ENST00000618696 141 ntBASIC3.13□□□□□ -1.91
NEFMP07197 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NEFMP07197 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.13□□□□□ -1.91
NEFMP07197 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEFMP07197 AC005336.3-201ENST00000623833 2679 ntBASIC3.12□□□□□ -1.91
NEFMP07197 RNA5SP289-201ENST00000362332 137 ntBASIC3.12□□□□□ -1.91
NEFMP07197 MIR218-1-201ENST00000384999 110 ntBASIC3.12□□□□□ -1.91
NEFMP07197 MIR624-201ENST00000385217 97 ntBASIC3.12□□□□□ -1.91
NEFMP07197 RNA5SP127-201ENST00000411051 133 ntBASIC3.12□□□□□ -1.91
NEFMP07197 AC123900.1-201ENST00000420390 96 ntBASIC3.12□□□□□ -1.91
NEFMP07197 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.12□□□□□ -1.91
NEFMP07197 AL161788.1-201ENST00000441805 169 ntBASIC3.12□□□□□ -1.91
NEFMP07197 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
NEFMP07197 SNORD33.1-201ENST00000516213 88 ntBASIC3.12□□□□□ -1.91
NEFMP07197 RNU6-1146P-201ENST00000516282 102 ntBASIC3.12□□□□□ -1.91
NEFMP07197 SNORA18.4-201ENST00000516440 124 ntBASIC3.12□□□□□ -1.91
NEFMP07197 IGLV3-17-201ENST00000519099 244 ntBASIC3.12□□□□□ -1.91
NEFMP07197 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
NEFMP07197 AL365205.2-201ENST00000594586 68 ntBASIC3.12□□□□□ -1.91
NEFMP07197 AC067747.1-201ENST00000608026 250 ntBASIC3.12□□□□□ -1.91
NEFMP07197 AC046143.2-201ENST00000609789 160 ntBASIC3.12□□□□□ -1.91
NEFMP07197 AL449363.1-201ENST00000617815 186 ntBASIC3.12□□□□□ -1.91
NEFMP07197 U6.73-201ENST00000619194 103 ntBASIC3.12□□□□□ -1.91
NEFMP07197 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEFMP07197 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEFMP07197 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NEFMP07197 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC3.11□□□□□ -1.91
NEFMP07197 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
NEFMP07197 Y_RNA.332-201ENST00000365271 113 ntBASIC3.11□□□□□ -1.91
NEFMP07197 MIR95-201ENST00000385072 81 ntBASIC3.11□□□□□ -1.91
NEFMP07197 AC093259.1-201ENST00000509755 300 ntBASIC3.11□□□□□ -1.91
NEFMP07197 RNU6-1096P-201ENST00000517089 102 ntBASIC3.11□□□□□ -1.91
NEFMP07197 RNU6-365P-201ENST00000517113 106 ntBASIC3.11□□□□□ -1.91
NEFMP07197 NDUFA5P6-201ENST00000542110 379 ntBASIC3.11□□□□□ -1.91
NEFMP07197 AC091178.2-201ENST00000584401 117 ntBASIC3.11□□□□□ -1.91
NEFMP07197 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.11□□□□□ -1.91
NEFMP07197 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEFMP07197 SNORD58C-201ENST00000365223 64 ntBASIC3.1□□□□□ -1.91
NEFMP07197 SNORA22-201ENST00000383907 134 ntBASIC3.1□□□□□ -1.91
NEFMP07197 Y_RNA.617-201ENST00000410920 90 ntBASIC3.1□□□□□ -1.91
NEFMP07197 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.1□□□□□ -1.91
NEFMP07197 MTATP6P21-201ENST00000440681 189 ntBASIC3.1□□□□□ -1.91
NEFMP07197 RPS26P45-201ENST00000471748 340 ntBASIC3.1□□□□□ -1.91
NEFMP07197 SNORA48.11-201ENST00000517015 89 ntBASIC3.1□□□□□ -1.91
NEFMP07197 RNU2-60P-201ENST00000517290 128 ntBASIC3.1□□□□□ -1.91
NEFMP07197 AC121758.2-201ENST00000553271 193 ntBASIC3.1□□□□□ -1.91
NEFMP07197 MIR3945-201ENST00000581853 98 ntBASIC3.1□□□□□ -1.91
NEFMP07197 AC108081.1-201ENST00000604358 221 ntBASIC3.1□□□□□ -1.91
NEFMP07197 U2.20-201ENST00000613956 192 ntBASIC3.1□□□□□ -1.91
NEFMP07197 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.1□□□□□ -1.91
NEFMP07197 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEFMP07197 Y_RNA.52-201ENST00000362760 96 ntBASIC3.09□□□□□ -1.91
NEFMP07197 MIR548A3-201ENST00000385297 97 ntBASIC3.09□□□□□ -1.91
NEFMP07197 RN7SKP284-201ENST00000411002 343 ntBASIC3.09□□□□□ -1.91
NEFMP07197 AC063976.4-201ENST00000421971 163 ntBASIC3.09□□□□□ -1.91
NEFMP07197 AC064859.1-201ENST00000624741 174 ntBASIC3.09□□□□□ -1.91
NEFMP07197 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
NEFMP07197 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms