Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 TRBV12-1-201ENST00000479785 344 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 SNORA74D-201ENST00000516404 141 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 RNU6-504P-201ENST00000516568 104 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 Y_RNA.714-201ENST00000517065 90 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 Y_RNA.757-201ENST00000578934 114 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.17□□□□□ -2.06
SPDEFO95238 AC022513.1-201ENST00000624512 117 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 AC131280.1-202ENST00000624067 4211 ntBASIC2.17□□□□□ -2.06
SPDEFO95238 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPDEFO95238 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SPDEFO95238 Y_RNA.81-201ENST00000362997 102 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 Y_RNA.242-201ENST00000364473 110 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 Y_RNA.280-201ENST00000364765 112 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 Y_RNA.294-201ENST00000364916 102 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 SNORA70.4-201ENST00000365509 134 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 Y_RNA.563-201ENST00000384707 108 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 MIR522-201ENST00000385071 87 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 MIR29C-201ENST00000385231 88 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 RNA5SP127-201ENST00000411051 133 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.16□□□□□ -2.06
SPDEFO95238 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.16□□□□□ -2.06
SPDEFO95238 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 AC107083.1-201ENST00000439643 279 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 RNU7-107P-201ENST00000459121 61 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 RN7SKP179-201ENST00000516126 217 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 Y_RNA.692-201ENST00000516627 105 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 RNU2-60P-201ENST00000517290 128 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.16□□□□□ -2.06
SPDEFO95238 AC090049.2-201ENST00000550377 109 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 AC091544.4-201ENST00000555268 342 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
SPDEFO95238 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
SPDEFO95238 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SPDEFO95238 RNU1-58P-201ENST00000362413 163 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 SNORD115-3-201ENST00000363100 82 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 RNU6-525P-201ENST00000363685 104 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 SNORD24-201ENST00000383884 75 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 SNORD61-201ENST00000384252 73 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 RNU1-148P-201ENST00000384472 162 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 MLLT10P1-201ENST00000418346 262 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 FTH1P12-201ENST00000432137 551 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 AC105272.1-201ENST00000438604 198 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.15□□□□□ -2.07
SPDEFO95238 SNORA18.4-201ENST00000516440 124 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 MIR5092-201ENST00000583139 88 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 ELOCP29-201ENST00000588193 334 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 AC022217.4-201ENST00000604389 163 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 CTSLP2-204ENST00000629029 392 ntBASIC2.15□□□□□ -2.07
SPDEFO95238 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SPDEFO95238 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPDEFO95238 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
SPDEFO95238 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SPDEFO95238 RNU6-834P-201ENST00000362367 110 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 Y_RNA.52-201ENST00000362760 96 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 RNU6-888P-201ENST00000363010 101 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 RNU6-215P-201ENST00000365169 102 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 SNORA1-201ENST00000384107 130 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 SNORA9-201ENST00000384215 133 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 SNORD20-201ENST00000384550 80 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 AL603914.1-201ENST00000401964 204 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 SNORA11.4-201ENST00000408823 129 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 AL606517.2-201ENST00000442855 241 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.14□□□□□ -2.07
SPDEFO95238 Y_RNA.712-201ENST00000517011 92 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 MIR3121-201ENST00000579680 77 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 MIR3129-201ENST00000581095 76 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 MIR4762-201ENST00000585261 75 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 AC005786.1-201ENST00000588553 154 ntBASIC2.14□□□□□ -2.07
SPDEFO95238 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SPDEFO95238 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SPDEFO95238 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SPDEFO95238 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SPDEFO95238 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SPDEFO95238 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
SPDEFO95238 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.13□□□□□ -2.07
SPDEFO95238 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SPDEFO95238 RNU6-235P-201ENST00000362644 107 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 RNU6-859P-201ENST00000362728 107 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 U8.5-201ENST00000364528 136 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 Y_RNA.333-201ENST00000365274 102 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 SNORD18B-201ENST00000365659 72 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 RNU6-1292P-201ENST00000383856 107 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 Y_RNA.525-201ENST00000384570 113 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 MIR891A-201ENST00000401237 79 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 AL158823.1-201ENST00000418441 478 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 Y_RNA.666-201ENST00000516187 112 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 RNA5SP282-201ENST00000516355 108 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 RNU6-1270P-201ENST00000517128 108 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 MIR3126-201ENST00000577443 74 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
SPDEFO95238 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.13□□□□□ -2.07
SPDEFO95238 AL136360.1-201ENST00000503377 1900 ntBASIC2.13□□□□□ -2.07
SPDEFO95238 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.12□□□□□ -2.07
SPDEFO95238 SNORD68-201ENST00000363214 84 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms