Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
PRAMEF11O60813 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PRAMEF11O60813 RNU6-801P-201ENST00000364087 105 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 RNU6-290P-201ENST00000365212 101 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 Y_RNA.541-201ENST00000384640 113 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 MTCO1P5-201ENST00000433573 344 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.36□□□□□ -2.19
PRAMEF11O60813 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 RPL23AP54-201ENST00000495129 419 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 CYCTP-201ENST00000504253 315 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 AC114811.1-201ENST00000507207 168 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 RNU6-917P-201ENST00000516294 104 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 AC136628.3-201ENST00000521868 290 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 CYP3A52P-201ENST00000563326 91 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 MIR3664-201ENST00000579074 99 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 MIR548AY-201ENST00000617669 107 ntBASIC1.36□□□□□ -2.19
PRAMEF11O60813 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.36□□□□□ -2.19
PRAMEF11O60813 Y_RNA.136-201ENST00000363444 102 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 U8.5-201ENST00000364528 136 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 MIR522-201ENST00000385071 87 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 RNU6-1248P-201ENST00000391096 64 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 SNORA26.5-201ENST00000391215 123 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
PRAMEF11O60813 AL603825.1-201ENST00000438481 80 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 DYNLT3P2-201ENST00000442517 295 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 RNU7-141P-201ENST00000459304 62 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 HMGN1P7-201ENST00000491722 313 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 AP003733.2-201ENST00000529409 171 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 AC127455.1-201ENST00000565496 145 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 AC134026.1-201ENST00000623249 2239 ntBASIC1.35□□□□□ -2.19
PRAMEF11O60813 RNU6-833P-201ENST00000363486 107 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 SNORA72.4-201ENST00000384174 132 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 MIR653-201ENST00000385279 96 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PRAMEF11O60813 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.34□□□□□ -2.19
PRAMEF11O60813 SNRPGP10-201ENST00000432323 225 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 MTND5P22-201ENST00000458380 195 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 MIR4762-201ENST00000585261 75 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 AL513534.2-201ENST00000603836 250 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.34□□□□□ -2.19
PRAMEF11O60813 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.34□□□□□ -2.19
PRAMEF11O60813 AC027279.3-201ENST00000625055 122 ntBASIC1.34□□□□□ -2.19
PRAMEF11O60813 RNU6-694P-201ENST00000364071 147 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 Y_RNA.203-201ENST00000364106 102 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 Y_RNA.326-201ENST00000365176 113 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 MIR526A1-201ENST00000384897 85 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
PRAMEF11O60813 MTCO2P33-201ENST00000402100 465 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 RNU6-1143P-201ENST00000516125 104 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 RN7SKP88-201ENST00000516847 250 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 7SK.8-201ENST00000612110 250 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
PRAMEF11O60813 Y_RNA.16-201ENST00000362421 102 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 RNU6-1084P-201ENST00000362498 107 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 SNORA2.2-201ENST00000365473 135 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 SNORD41-201ENST00000386967 70 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 RNU6-131P-201ENST00000391144 107 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 AL731563.1-201ENST00000442202 214 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 U8.19-201ENST00000459095 133 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 RNU2-31P-201ENST00000516954 155 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 AC090049.2-201ENST00000550377 109 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
PRAMEF11O60813 RNU6-763P-201ENST00000390865 106 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 SNORA53-201ENST00000391141 249 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 AL451046.2-201ENST00000403074 277 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 MIR1278-201ENST00000408753 81 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 AC005357.1-201ENST00000588399 301 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 AL512605.2-201ENST00000592972 256 ntBASIC1.31□□□□□ -2.2
PRAMEF11O60813 SNORA25.1-201ENST00000362326 128 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 Y_RNA.84-201ENST00000363011 104 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 SNORA63-201ENST00000363450 132 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 SNORD50B-201ENST00000364995 70 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 Y_RNA.422-201ENST00000384054 114 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.3□□□□□ -2.2
PRAMEF11O60813 RNU6-437P-201ENST00000459408 95 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 MTATP8P1-201ENST00000467115 207 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 RNU6-570P-201ENST00000517051 105 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 AC006504.6-201ENST00000590142 199 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 AC037487.3-201ENST00000606668 112 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
PRAMEF11O60813 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 254.9 ms