Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
NPHS1O60500 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
NPHS1O60500 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.55□□□□□ -2
NPHS1O60500 AC245047.3-201ENST00000429428 127 ntBASIC2.55□□□□□ -2
NPHS1O60500 RN7SKP179-201ENST00000516126 217 ntBASIC2.55□□□□□ -2
NPHS1O60500 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
NPHS1O60500 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.55□□□□□ -2
NPHS1O60500 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.55□□□□□ -2
NPHS1O60500 Y_RNA.114-201ENST00000363265 113 ntBASIC2.54□□□□□ -2
NPHS1O60500 SNORD24-201ENST00000383884 75 ntBASIC2.54□□□□□ -2
NPHS1O60500 MIR548A2-201ENST00000384956 97 ntBASIC2.54□□□□□ -2
NPHS1O60500 MIR29C-201ENST00000385231 88 ntBASIC2.54□□□□□ -2
NPHS1O60500 MIR891A-201ENST00000401237 79 ntBASIC2.54□□□□□ -2
NPHS1O60500 AL603914.1-201ENST00000401964 204 ntBASIC2.54□□□□□ -2
NPHS1O60500 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
NPHS1O60500 AL158147.1-201ENST00000443970 75 ntBASIC2.54□□□□□ -2
NPHS1O60500 RNU5E-3P-201ENST00000515913 68 ntBASIC2.54□□□□□ -2
NPHS1O60500 RNU6-693P-201ENST00000516134 107 ntBASIC2.54□□□□□ -2
NPHS1O60500 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
NPHS1O60500 AL391516.1-201ENST00000554380 2449 ntBASIC2.54□□□□□ -2
NPHS1O60500 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NPHS1O60500 ICE2P2-201ENST00000483823 2787 ntBASIC2.54□□□□□ -2
NPHS1O60500 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NPHS1O60500 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPHS1O60500 RNU6-525P-201ENST00000363685 104 ntBASIC2.53□□□□□ -2
NPHS1O60500 RNU6-1325P-201ENST00000364905 105 ntBASIC2.53□□□□□ -2
NPHS1O60500 MIR483-201ENST00000385070 76 ntBASIC2.53□□□□□ -2
NPHS1O60500 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
NPHS1O60500 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
NPHS1O60500 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.53□□□□□ -2
NPHS1O60500 SNRPGP13-201ENST00000442212 177 ntBASIC2.53□□□□□ -2
NPHS1O60500 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.53□□□□□ -2
NPHS1O60500 RNU6-772P-201ENST00000516042 105 ntBASIC2.53□□□□□ -2
NPHS1O60500 Y_RNA.712-201ENST00000517011 92 ntBASIC2.53□□□□□ -2
NPHS1O60500 AC005786.1-201ENST00000588553 154 ntBASIC2.53□□□□□ -2
NPHS1O60500 AL161756.2-201ENST00000604597 246 ntBASIC2.53□□□□□ -2
NPHS1O60500 MTND5P32-201ENST00000560711 1802 ntBASIC2.53□□□□□ -2
NPHS1O60500 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPHS1O60500 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
NPHS1O60500 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHS1O60500 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHS1O60500 MIR597-201ENST00000384968 97 ntBASIC2.52□□□□□ -2.01
NPHS1O60500 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
NPHS1O60500 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
NPHS1O60500 AC084364.2-201ENST00000546924 395 ntBASIC2.52□□□□□ -2.01
NPHS1O60500 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
NPHS1O60500 MIR4762-201ENST00000585261 75 ntBASIC2.52□□□□□ -2.01
NPHS1O60500 RNU6-1084P-201ENST00000362498 107 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 Y_RNA.265-201ENST00000364677 108 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 RNU6-1292P-201ENST00000383856 107 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 SNORA44-201ENST00000384584 132 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 MIR518F-201ENST00000384973 87 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 MIR802-201ENST00000390235 94 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 RNU11-3P-201ENST00000391111 133 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 AC107083.1-201ENST00000439643 279 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 AC079600.2-201ENST00000550076 130 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 MIR5094-201ENST00000578766 85 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHS1O60500 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.51□□□□□ -2.01
NPHS1O60500 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NPHS1O60500 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHS1O60500 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
NPHS1O60500 RNU6-834P-201ENST00000362367 110 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 Y_RNA.242-201ENST00000364473 110 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 U8.5-201ENST00000364528 136 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 RNU6-44P-201ENST00000384045 107 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 RNU6-440P-201ENST00000390882 105 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 SNORA40.5-201ENST00000391061 128 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 SNORD77.3-201ENST00000391113 65 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 RNA5SP482-201ENST00000391269 118 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.5□□□□□ -2.01
NPHS1O60500 AL035461.1-201ENST00000421490 332 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.5□□□□□ -2.01
NPHS1O60500 AF228730.3-201ENST00000436691 102 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 Y_RNA.651-201ENST00000459380 103 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 RNU6-919P-201ENST00000516731 104 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 AL022345.2-201ENST00000606307 135 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 MIR3914-2-201ENST00000637339 95 ntBASIC2.5□□□□□ -2.01
NPHS1O60500 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.5□□□□□ -2.01
NPHS1O60500 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPHS1O60500 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPHS1O60500 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHS1O60500 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.49□□□□□ -2.01
NPHS1O60500 SNORD14E-201ENST00000364009 85 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 RNU6-1019P-201ENST00000364424 107 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 RNU6-442P-201ENST00000383968 104 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 RNU6-1056P-201ENST00000383996 107 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 SNORA9-201ENST00000384215 133 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 Y_RNA.630-201ENST00000411370 108 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 RNA5SP236-201ENST00000516169 116 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 RNU6-1061P-201ENST00000516530 99 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 SNORD45.4-201ENST00000516629 73 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 RNA5SP137-201ENST00000516833 135 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 AC133485.4-201ENST00000561835 220 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 AC138907.4-201ENST00000570107 226 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 AC006441.5-201ENST00000612680 209 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 342.6 ms