Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.57□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-271P-201ENST00000363858 105 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-309P-201ENST00000364573 106 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNA5SP125-201ENST00000364843 120 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-1080P-201ENST00000383982 107 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORA1-201ENST00000384107 130 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.486-201ENST00000384398 107 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.521-201ENST00000384560 114 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORD72-201ENST00000390994 80 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MLLT10P1-201ENST00000418346 262 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC123900.1-201ENST00000420390 96 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.651-201ENST00000459380 103 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-772P-201ENST00000516042 105 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SCARNA16.3-201ENST00000516595 184 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU7-116P-201ENST00000516940 62 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.712-201ENST00000517011 92 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORA48.11-201ENST00000517015 89 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU7-172P-201ENST00000517125 64 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AP001328.1-201ENST00000528550 176 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC011604.1-201ENST00000545978 196 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR5694-201ENST00000581190 76 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC005000.2-201ENST00000605468 310 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORD14A-201ENST00000606526 91 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR6129-201ENST00000616087 109 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 uc_338.4-201ENST00000616635 176 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC006435.5-201ENST00000624486 112 ntBASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
IGKV3D-20A0A0C4DH25 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORA3A-201ENST00000364113 130 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR548A2-201ENST00000384956 97 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNA5SP496-201ENST00000391240 109 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC003685.2-201ENST00000422795 395 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC010154.1-201ENST00000425857 269 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL606517.2-201ENST00000442855 241 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC079804.2-201ENST00000490376 200 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-781P-201ENST00000516377 101 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-1291P-201ENST00000516591 104 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-919P-201ENST00000516731 104 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR3121-201ENST00000579680 77 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORD53-201ENST00000579969 78 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC002984.1-201ENST00000591692 448 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC073413.2-201ENST00000604332 360 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 U7.2-201ENST00000607576 63 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR7157-201ENST00000635801 60 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR3914-2-201ENST00000637339 95 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC009487.4-201ENST00000624969 3585 ntBASIC1.55□□□□□ -2.16
IGKV3D-20A0A0C4DH25 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-1298P-201ENST00000362456 101 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-438P-201ENST00000365561 103 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR539-201ENST00000365690 78 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.432-201ENST00000384087 111 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORD23.1-201ENST00000408212 104 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNRPGP10-201ENST00000432323 225 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC011406.1-201ENST00000512440 370 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORD33.1-201ENST00000516213 88 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU7-149P-201ENST00000516739 59 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-1096P-201ENST00000517089 102 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-667P-201ENST00000517186 102 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL160236.1-201ENST00000556317 195 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR3200-201ENST00000580767 85 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL359881.1-201ENST00000602916 267 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC108081.1-201ENST00000604358 221 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC022202.1-201ENST00000613515 211 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 TUG1_4.1-201ENST00000619464 181 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNA5SP289-201ENST00000362332 137 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.52-201ENST00000362760 96 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORA5B-201ENST00000363786 132 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.253-201ENST00000364562 112 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 Y_RNA.584-201ENST00000391090 114 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU2-55P-201ENST00000411146 174 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AC099677.2-201ENST00000436385 175 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MRPS17P9-201ENST00000511924 393 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNA5SP236-201ENST00000516169 116 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 RNU6-1041P-201ENST00000516254 102 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 CYCSP26-201ENST00000534107 320 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 MIR6798-201ENST00000612887 67 ntBASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.16
IGKV3D-20A0A0C4DH25 AL596028.1-201ENST00000326971 197 ntBASIC1.52□□□□□ -2.17
IGKV3D-20A0A0C4DH25 snoU2-30.2-201ENST00000362805 70 ntBASIC1.52□□□□□ -2.17
IGKV3D-20A0A0C4DH25 Y_RNA.111-201ENST00000363248 100 ntBASIC1.52□□□□□ -2.17
IGKV3D-20A0A0C4DH25 Y_RNA.114-201ENST00000363265 113 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms