Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC009237.6-201ENST00000446969 424 ntBASIC3.35□□□□□ -1.87
PCDHB11Q9Y5F2 SNORA70.19-201ENST00000516717 90 ntBASIC3.35□□□□□ -1.87
PCDHB11Q9Y5F2 MIR3683-201ENST00000580847 82 ntBASIC3.35□□□□□ -1.87
PCDHB11Q9Y5F2 MIR3163-201ENST00000581592 73 ntBASIC3.35□□□□□ -1.87
PCDHB11Q9Y5F2 AC015726.2-201ENST00000620112 122 ntBASIC3.35□□□□□ -1.87
PCDHB11Q9Y5F2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB11Q9Y5F2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 MIR30E-201ENST00000362104 92 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 RNA5SP493-201ENST00000364115 91 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 Y_RNA.454-201ENST00000384224 113 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 RN7SKP111-201ENST00000410349 271 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 AC245047.3-201ENST00000429428 127 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 AL606517.2-201ENST00000442855 241 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 RNU6-904P-201ENST00000516206 101 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 RNU6-762P-201ENST00000517107 102 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 MIR4778-201ENST00000577635 80 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 AC002984.1-201ENST00000591692 448 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 AC091932.4-201ENST00000623386 200 ntBASIC3.34□□□□□ -1.87
PCDHB11Q9Y5F2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHB11Q9Y5F2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 Y_RNA.265-201ENST00000364677 108 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 Y_RNA.388-201ENST00000383919 113 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 AL049873.1-201ENST00000480540 376 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 AC022523.2-201ENST00000561045 150 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 MIR3169-201ENST00000578032 83 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 U4atac.1-201ENST00000618345 95 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB11Q9Y5F2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 AL627390.1-201ENST00000396055 340 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 AC104332.2-201ENST00000429959 156 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 AC141557.1-201ENST00000540982 400 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 MIR2052-201ENST00000636055 55 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 AL596211.1-201ENST00000569873 2277 ntBASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB11Q9Y5F2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 MTATP8P2-201ENST00000435212 202 ntBASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 RNU2-35P-201ENST00000516446 142 ntBASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 YPEL5P2-201ENST00000605553 359 ntBASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 AL162726.3-218ENST00000636401 95 ntBASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 AC245060.5-201ENST00000610778 3293 ntBASIC3.31□□□□□ -1.88
PCDHB11Q9Y5F2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 Z83843.1-201ENST00000604070 3685 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 AL355596.1-201ENST00000565399 3996 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 Y_RNA.220-201ENST00000364244 109 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 IGKV2-26-201ENST00000518305 343 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 MIR5680-201ENST00000577577 84 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 MIR4513-201ENST00000581077 86 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 AL442128.1-201ENST00000615151 90 ntBASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB11Q9Y5F2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 RNU6-23P-201ENST00000363283 107 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 SNORD38C-201ENST00000384381 69 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 AC115115.1-201ENST00000449927 248 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 MIR2276-201ENST00000516886 89 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 AC078899.2-201ENST00000595282 212 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 AL162274.2-201ENST00000614406 332 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 MIR7112-201ENST00000616126 65 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 ICE2P2-201ENST00000483823 2787 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 MAPK10-362ENST00000641864 4484 ntBASIC3.29□□□□□ -1.88
PCDHB11Q9Y5F2 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHB11Q9Y5F2 RNA5SP109-201ENST00000391010 116 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms