Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 AC011373.1-201ENST00000607270 237 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 uc_338.22-201ENST00000622722 187 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 SNORD14.1-201ENST00000365609 90 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.431-201ENST00000384086 102 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.526-201ENST00000384572 110 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-21P-201ENST00000384710 107 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 AL451046.2-201ENST00000403074 277 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 MLLT10P1-201ENST00000418346 262 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 RPS20P10-201ENST00000451209 253 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 U8.20-201ENST00000459445 131 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-322P-201ENST00000516010 103 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 DEFB117-201ENST00000602356 141 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 AC005972.2-201ENST00000604690 348 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 MIR8070-201ENST00000616510 88 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 AL591926.4-201ENST00000616895 298 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 AC090971.5-201ENST00000621102 293 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ATG4BQ9Y4P1 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 RNU4-50P-201ENST00000364361 141 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 RNU5E-4P-201ENST00000364931 120 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 MIR891A-201ENST00000401237 79 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-710P-201ENST00000410424 105 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 AL390729.2-201ENST00000416137 156 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 HMGN1P7-201ENST00000491722 313 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 MIR3145-201ENST00000580727 82 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 MIR4423-201ENST00000580922 80 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 AC120024.3-201ENST00000603167 156 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
ATG4BQ9Y4P1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-867P-201ENST00000364956 107 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 SNORA25-201ENST00000384384 134 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.509-201ENST00000384506 99 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 SNORD41-201ENST00000386967 70 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 AL590004.1-201ENST00000405321 300 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 CYCTP-201ENST00000504253 315 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 AC114811.1-201ENST00000507207 168 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 SNORA25.10-201ENST00000515926 124 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
ATG4BQ9Y4P1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 SNORD81.1-201ENST00000363064 77 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 MTND4P19-201ENST00000446659 478 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 SNORA31.4-201ENST00000516049 129 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-397P-201ENST00000516226 104 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.713-201ENST00000517013 96 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 AC022616.4-201ENST00000522985 181 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 FAM106DP-201ENST00000586416 501 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 PART1_1.1-201ENST00000611761 217 ntBASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 MIR1302-11-201ENST00000408051 138 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 MIR1302-9-201ENST00000408365 138 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 MIR1302-10-201ENST00000408734 138 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 AC024067.1-201ENST00000426199 223 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-475P-201ENST00000516073 104 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 MIR1302-2-201ENST00000607096 138 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.06□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-833P-201ENST00000363486 107 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-450P-201ENST00000364654 107 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 SNORD42.2-201ENST00000365570 69 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 SNORA72-201ENST00000384339 132 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 MIR526A1-201ENST00000384897 85 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-130P-201ENST00000411112 103 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 SNORA31.2-201ENST00000516019 134 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 C8orf59P2-201ENST00000603441 271 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 AC124312.5-201ENST00000604451 268 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 BX284668.6-201ENST00000606899 438 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 AC090574.1-201ENST00000623186 233 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms