Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.62□□□□□ -1.99
PPARGC1AQ9UBK2 AC112693.2-201ENST00000556538 232 ntBASIC2.62□□□□□ -1.99
PPARGC1AQ9UBK2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.62□□□□□ -1.99
PPARGC1AQ9UBK2 AC005786.1-201ENST00000588553 154 ntBASIC2.62□□□□□ -1.99
PPARGC1AQ9UBK2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PPARGC1AQ9UBK2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-23P-201ENST00000363283 107 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 SNORA8-201ENST00000384574 139 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 SNORA11.4-201ENST00000408823 129 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 SNORA59A-201ENST00000459326 152 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 HMGN1P7-201ENST00000491722 313 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 OR9P1P-201ENST00000496431 281 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-426P-201ENST00000516464 97 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 AP002004.2-201ENST00000531656 154 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 MIR4672-201ENST00000583126 81 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 AC087685.1-201ENST00000587507 141 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 MIR3658-201ENST00000636291 56 ntBASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPARGC1AQ9UBK2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 RNU1-58P-201ENST00000362413 163 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 RNA5SP456-201ENST00000364002 114 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-768P-201ENST00000384683 107 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 SNORD37.2-201ENST00000391075 66 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 Y_RNA.586-201ENST00000391146 98 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 SNORA11.2-201ENST00000408318 127 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 AC245047.4-201ENST00000433189 144 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 RNA5SP320-201ENST00000516263 124 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 AC091895.1-201ENST00000624494 256 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 MIR6844-201ENST00000637122 62 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 AC010332.2-201ENST00000613083 1904 ntBASIC2.6□□□□□ -1.99
PPARGC1AQ9UBK2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-1117P-201ENST00000384525 104 ntBASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-1081P-201ENST00000384537 107 ntBASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 SNORA40-201ENST00000388090 126 ntBASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 RNA5SP148-201ENST00000516527 94 ntBASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
PPARGC1AQ9UBK2 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 RNU6-959P-201ENST00000384671 107 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 RNU7-149P-201ENST00000516739 59 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 MIR548AI-201ENST00000579940 88 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 MIR4513-201ENST00000581077 86 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PPARGC1AQ9UBK2 RNU6-978P-201ENST00000364371 103 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 RNU6-818P-201ENST00000364837 108 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.291-201ENST00000364886 113 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 RNU6-257P-201ENST00000410238 98 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 RNU2-70P-201ENST00000410718 179 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 SNRPGP10-201ENST00000432323 225 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 AC233266.1-201ENST00000454518 96 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 RNU7-197P-201ENST00000458836 62 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 AL163195.1-201ENST00000496941 348 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 AC242852.1-201ENST00000612151 96 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 AC244015.1-201ENST00000622301 99 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.57□□□□□ -2
PPARGC1AQ9UBK2 ZNF702P-202ENST00000434269 1966 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 SNORA33-201ENST00000363664 130 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 SNORA25.7-201ENST00000364375 127 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.634-201ENST00000364811 113 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 AC099677.2-201ENST00000436385 175 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 SNORA25.12-201ENST00000516202 82 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
PPARGC1AQ9UBK2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 RNA5SP465-201ENST00000391195 109 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms