Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIR5690-201ENST00000583739 73 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 AL357312.1-201ENST00000603879 298 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 AL008636.1-201ENST00000625038 1018 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
TM9SF3Q9HD45 RNU6-324P-201ENST00000363957 106 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.393-201ENST00000383936 102 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 AL451046.2-201ENST00000403074 277 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 RNU6-1199P-201ENST00000411249 104 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 snoU13.25-201ENST00000458945 104 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 SNORA25.10-201ENST00000515926 124 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 RNU6-155P-201ENST00000516347 100 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 AC005730.3-201ENST00000583067 366 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 AC240442.1-201ENST00000616055 283 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 AC138305.3-201ENST00000624988 240 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 U6.92-201ENST00000636464 89 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 AC099654.14-201ENST00000638599 341 ntBASIC0.83□□□□□ -2.28
TM9SF3Q9HD45 RNU6-626P-201ENST00000363354 107 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.259-201ENST00000364619 101 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.361-201ENST00000365515 120 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 RNU6-163P-201ENST00000384396 106 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 RNA5SP482-201ENST00000391269 118 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 FCF1P4-201ENST00000448326 183 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 DEFB108E-201ENST00000524692 240 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 MIR3684-201ENST00000579779 74 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 MIR4659A-201ENST00000580269 81 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 AL096861.1-201ENST00000610899 123 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 AL591926.4-201ENST00000616895 298 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 AC104985.2-201ENST00000620598 500 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 MIR1302-1-201ENST00000637932 143 ntBASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.142-201ENST00000363491 102 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.303-201ENST00000364998 94 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 RNU6-1310P-201ENST00000384153 107 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.446-201ENST00000384178 104 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 RNY3P4-201ENST00000384428 101 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 MIR520G-201ENST00000385064 90 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 AL162725.1-201ENST00000435405 301 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 AC082651.2-201ENST00000496833 166 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 AC114811.1-201ENST00000507207 168 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 RNU6-1012P-201ENST00000516606 109 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 RNU6-197P-201ENST00000516680 100 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 AC005176.2-201ENST00000596933 147 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 AC120024.3-201ENST00000603167 156 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 AC004832.4-201ENST00000608952 331 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 U2.1-201ENST00000618978 145 ntBASIC0.81□□□□□ -2.28
TM9SF3Q9HD45 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 RNU6-1297P-201ENST00000384415 104 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.496-201ENST00000384444 101 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 MIR516B2-201ENST00000385190 85 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 RNY4P36-201ENST00000391116 96 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 RNU2-54P-201ENST00000410299 190 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 MLLT10P1-201ENST00000418346 262 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 AC093019.1-201ENST00000443135 252 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 RNU7-28P-201ENST00000516759 62 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.718-201ENST00000517110 102 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 MIR2355-201ENST00000517199 87 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 AL132765.2-201ENST00000610812 351 ntBASIC0.8□□□□□ -2.28
TM9SF3Q9HD45 SNORA2.2-201ENST00000365473 135 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 MIR628-201ENST00000385229 95 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 SNORD78.2-201ENST00000391076 69 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 MIR891A-201ENST00000401237 79 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AL390729.2-201ENST00000416137 156 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 RNU6-507P-201ENST00000516045 100 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 RNU6-436P-201ENST00000516171 114 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 SNORD111.1-201ENST00000516421 86 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 RNU7-4P-201ENST00000516961 62 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AC144568.1-201ENST00000520139 137 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AC093027.1-201ENST00000546698 429 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AC006600.1-201ENST00000572529 153 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AL355375.2-201ENST00000574825 175 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 RN7SL793P-201ENST00000583259 296 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 MIR3192-201ENST00000584920 77 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 AC006380.1-201ENST00000603598 186 ntBASIC0.79□□□□□ -2.28
TM9SF3Q9HD45 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 AC008163.1-202ENST00000636004 2889 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 SNORA72.1-201ENST00000363485 129 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.329-201ENST00000365209 107 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 Y_RNA.387-201ENST00000383918 102 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 RNU6-1040P-201ENST00000383974 107 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 MIR562-201ENST00000384894 95 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 SNORA75.2-201ENST00000391138 150 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 SNORA75.3-201ENST00000391231 150 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 RNU2-61P-201ENST00000411069 191 ntBASIC0.78□□□□□ -2.28
TM9SF3Q9HD45 MTND1P14-201ENST00000427400 950 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms