Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 RNU6-329P-201ENST00000459618 107 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 RPL7P42-201ENST00000481005 679 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 AC055872.1-201ENST00000570978 278 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 MIR548AR-201ENST00000582191 57 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 AC018638.8-201ENST00000588755 281 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 MIR1244-1-201ENST00000612829 85 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 AC092794.2-201ENST00000620933 563 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 MIR1244-3-201ENST00000635744 85 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 MIR1244-2-201ENST00000636449 85 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 MIR1244-4-202ENST00000636813 85 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 AC027514.1-201ENST00000588561 1603 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.148-201ENST00000363557 117 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 RNU4-75P-201ENST00000364621 146 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.368-201ENST00000365547 113 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 SNRPGP10-201ENST00000432323 225 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 RPS3AP52-201ENST00000435639 297 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 MIR2115-201ENST00000516657 100 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 AC005899.2-201ENST00000584353 90 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 AC005972.2-201ENST00000604690 348 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 AC243829.3-201ENST00000622177 108 ntBASIC0.36□□□□□ -2.35
LRRC40Q9H9A6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 RNU6-926P-201ENST00000384075 107 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 RNU6-601P-201ENST00000384540 107 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 MIR548F5-201ENST00000408421 86 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 RNU2-54P-201ENST00000410299 190 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 RNU6-613P-201ENST00000410412 108 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 MIR2053-201ENST00000459295 91 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 PISRT1.1-201ENST00000616930 107 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
LRRC40Q9H9A6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.101-201ENST00000363154 102 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 RNU6-324P-201ENST00000363957 106 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 SNORA72-201ENST00000384339 132 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 SNORD28B-201ENST00000390993 75 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 MIR548K-201ENST00000408406 116 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 RNU2-61P-201ENST00000411069 191 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 RPL17P19-201ENST00000489069 552 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 AC240442.1-201ENST00000616055 283 ntBASIC0.34□□□□□ -2.36
LRRC40Q9H9A6 SNORD14E-201ENST00000364009 85 ntBASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 RNU6-510P-201ENST00000391239 108 ntBASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 CHEK2P4-201ENST00000450340 246 ntBASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 MTND3P10-201ENST00000450967 341 ntBASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 AL078603.1-201ENST00000603824 313 ntBASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.168-201ENST00000363740 102 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 RNU6-396P-201ENST00000365369 105 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.370-201ENST00000365589 108 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.404-201ENST00000383978 102 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.453-201ENST00000384223 109 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 SNORD38C-201ENST00000384381 69 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 MTND4P28-201ENST00000426217 387 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 AC093534.1-201ENST00000504977 132 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 RNU6-1012P-201ENST00000516606 109 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 RNU6-307P-201ENST00000516743 106 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 AL355375.2-201ENST00000574825 175 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 MIR4711-201ENST00000578274 70 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 AC048344.4-201ENST00000619744 527 ntBASIC0.32□□□□□ -2.36
LRRC40Q9H9A6 RNU6-99P-201ENST00000364721 107 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.482-201ENST00000384377 111 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 MIR573-201ENST00000384964 99 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 AC107399.1-201ENST00000451226 265 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 RPS29P25-201ENST00000481709 171 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 AC011352.1-201ENST00000512300 793 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.676-201ENST00000516393 96 ntBASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.31□□□□□ -2.36
LRRC40Q9H9A6 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 MIR570-201ENST00000384917 97 ntBASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 RNU6-155P-201ENST00000516347 100 ntBASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 AC005176.2-201ENST00000596933 147 ntBASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 AC007742.2-201ENST00000618226 398 ntBASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 AC015726.2-201ENST00000620112 122 ntBASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.3□□□□□ -2.36
LRRC40Q9H9A6 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.376-201ENST00000365638 108 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 RNU6-342P-201ENST00000384521 104 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 SNORA69.1-201ENST00000390904 137 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 RNU6-192P-201ENST00000391253 100 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 MIR936-201ENST00000401264 98 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 278.6 ms