Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC136628.3-201ENST00000521868 290 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 MIR4762-201ENST00000585261 75 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 RNU6-324P-201ENST00000363957 106 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.253-201ENST00000364562 112 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 SNORD116-29-201ENST00000384516 83 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 AC098614.3-201ENST00000438957 440 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 RBMX2P4-201ENST00000441256 376 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 AC245047.8-201ENST00000456455 284 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 RNU7-21P-201ENST00000459430 62 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 PRDX4P1-201ENST00000507189 574 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 RNU6-277P-201ENST00000516272 106 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 RNU6-699P-201ENST00000517081 110 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 U6.92-201ENST00000636464 89 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.146-201ENST00000363549 102 ntBASIC0.78□□□□□ -2.28
POLR1EQ9GZS1 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
POLR1EQ9GZS1 RNU6-1105P-201ENST00000384774 107 ntBASIC0.78□□□□□ -2.28
POLR1EQ9GZS1 MIR522-201ENST00000385071 87 ntBASIC0.78□□□□□ -2.28
POLR1EQ9GZS1 MIR516B2-201ENST00000385190 85 ntBASIC0.78□□□□□ -2.28
POLR1EQ9GZS1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 RNU6-1297P-201ENST00000384415 104 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 MIR452-201ENST00000385020 85 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 MLLT10P1-201ENST00000418346 262 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 RPS20P10-201ENST00000451209 253 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 AC022441.3-201ENST00000605737 136 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 AC099654.14-201ENST00000638599 341 ntBASIC0.77□□□□□ -2.29
POLR1EQ9GZS1 RNU6-490P-201ENST00000362985 107 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.142-201ENST00000363491 102 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.329-201ENST00000365209 107 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 MIR628-201ENST00000385229 95 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 RNU6-911P-201ENST00000516523 104 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 AC005972.2-201ENST00000604690 348 ntBASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.27-201ENST00000362540 103 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 SNORD50B-201ENST00000364995 70 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 AC117470.1-201ENST00000381974 330 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.387-201ENST00000383918 102 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 RNY4P36-201ENST00000391116 96 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 AL390729.2-201ENST00000416137 156 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 AC099799.1-201ENST00000439809 192 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 RNU7-41P-201ENST00000515917 61 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 SNORD45.4-201ENST00000516629 73 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.718-201ENST00000517110 102 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 AP003716.2-201ENST00000528260 108 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 AC025253.1-201ENST00000613623 543 ntBASIC0.75□□□□□ -2.29
POLR1EQ9GZS1 RNA5SP264-201ENST00000363115 107 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 SNORA25.3-201ENST00000363205 127 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.259-201ENST00000364619 101 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 RNU6-1175P-201ENST00000365200 107 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 RNU6-1283P-201ENST00000365314 105 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 RNU6-1040P-201ENST00000383974 107 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 MIR499A-201ENST00000384903 122 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 MCFD2P1-201ENST00000417812 300 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 SNORA74.3-201ENST00000517108 154 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 AC022616.4-201ENST00000522985 181 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 AC006600.1-201ENST00000572529 153 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 AC084781.2-201ENST00000615568 161 ntBASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.74□□□□□ -2.29
POLR1EQ9GZS1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.230-201ENST00000364348 109 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.463-201ENST00000384271 102 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 SNORA72-201ENST00000384339 132 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.570-201ENST00000384750 101 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 SNRPGP10-201ENST00000432323 225 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 SNORA18.7-201ENST00000516910 131 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 RN7SKP295-201ENST00000517264 153 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 VN1R91P-201ENST00000594377 169 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 RBM11P1-201ENST00000604951 799 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 AL132765.2-201ENST00000610812 351 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 AC133104.2-201ENST00000615272 193 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 MIR4272-201ENST00000635924 64 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 MIR1302-1-201ENST00000637932 143 ntBASIC0.73□□□□□ -2.29
POLR1EQ9GZS1 RNU6-1084P-201ENST00000362498 107 ntBASIC0.72□□□□□ -2.29
POLR1EQ9GZS1 SNORD81.1-201ENST00000363064 77 ntBASIC0.72□□□□□ -2.29
POLR1EQ9GZS1 Y_RNA.496-201ENST00000384444 101 ntBASIC0.72□□□□□ -2.29
POLR1EQ9GZS1 MIR520C-201ENST00000385005 87 ntBASIC0.72□□□□□ -2.29
POLR1EQ9GZS1 MIR605-201ENST00000385078 83 ntBASIC0.72□□□□□ -2.29
POLR1EQ9GZS1 MIR136-201ENST00000385207 82 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms