Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RNU6-1278P-201ENST00000516130 107 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-1337P-201ENST00000516525 95 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNA5SP168-201ENST00000516642 112 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU7-28P-201ENST00000516759 62 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-1096P-201ENST00000517089 102 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-1223P-201ENST00000517124 104 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 SNORD116.3-201ENST00000517176 78 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AC092447.9-201ENST00000603395 144 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AL357312.1-201ENST00000603879 298 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AC240442.1-201ENST00000616055 283 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 Y_RNA.5-201ENST00000362334 102 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 Y_RNA.146-201ENST00000363549 102 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 Y_RNA.172-201ENST00000363765 102 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 Y_RNA.315-201ENST00000365117 102 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 Y_RNA.361-201ENST00000365515 120 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 RNU6-424P-201ENST00000384367 105 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 SNORD116-13-201ENST00000384408 92 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 MIR7-2-201ENST00000384970 110 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 Y_RNA.579-201ENST00000390939 94 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 AL451046.2-201ENST00000403074 277 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 RNU5A-5P-201ENST00000411054 116 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 AC063976.4-201ENST00000421971 163 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 AC093850.1-201ENST00000454121 251 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.91□□□□□ -2.26
NPAS2Q99743 AC048334.1-201ENST00000477975 159 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 OR9P1P-201ENST00000496431 281 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 MTND3P22-201ENST00000510932 243 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 RNU6-322P-201ENST00000516010 103 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 RNU6-155P-201ENST00000516347 100 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 RNU6-341P-201ENST00000516973 96 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 AC136932.1-201ENST00000574771 208 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
NPAS2Q99743 VN1R91P-201ENST00000594377 169 ntBASIC0.91□□□□□ -2.26
NPAS2Q99743 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
NPAS2Q99743 Y_RNA.27-201ENST00000362540 103 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNU6-324P-201ENST00000363957 106 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 Y_RNA.446-201ENST00000384178 104 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 MIR613-201ENST00000385248 95 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNU2-54P-201ENST00000410299 190 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 AL354751.2-201ENST00000415471 210 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 MTND1P14-201ENST00000427400 950 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 AC236972.2-201ENST00000434979 310 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNU6-911P-201ENST00000516523 104 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNU4-77P-201ENST00000516692 156 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNA5SP480-201ENST00000516840 109 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 RNU6-1116P-201ENST00000517269 99 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 AP002004.2-201ENST00000531656 154 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 MIR5188-201ENST00000583467 113 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 AC006380.1-201ENST00000603598 186 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 AC091925.1-201ENST00000623204 462 ntBASIC0.9□□□□□ -2.27
NPAS2Q99743 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
NPAS2Q99743 AC068700.1-201ENST00000565862 3754 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 RNU4-41P-201ENST00000364426 143 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 SNORA2.2-201ENST00000365473 135 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 MTATP6P23-201ENST00000440153 476 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 SNORD58B-201ENST00000607313 66 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 PVT1_3.1-201ENST00000620853 95 ntBASIC0.89□□□□□ -2.27
NPAS2Q99743 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 MIR520G-201ENST00000385064 90 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 Y_RNA.621-201ENST00000411065 96 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 Z98949.2-201ENST00000440996 144 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 SUMO1P2-201ENST00000452524 304 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 RNU6-436P-201ENST00000516171 114 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 RNU6-917P-201ENST00000516294 104 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 AL117336.2-201ENST00000602435 335 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.88□□□□□ -2.27
NPAS2Q99743 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NPAS2Q99743 MIRLET7C-201ENST00000362160 84 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 Y_RNA.39-201ENST00000362620 98 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 Y_RNA.252-201ENST00000364556 101 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 RNU6-1175P-201ENST00000365200 107 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 Y_RNA.419-201ENST00000384041 102 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AL160004.2-201ENST00000432935 350 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AL162725.1-201ENST00000435405 301 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AC002429.1-201ENST00000437672 148 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 SNORA70.12-201ENST00000516084 153 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.87□□□□□ -2.27
NPAS2Q99743 AL133255.1-201ENST00000606374 441 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AC004832.4-201ENST00000608952 331 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AC007485.1-201ENST00000616755 206 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 AL606534.2-204ENST00000635008 178 ntBASIC0.87□□□□□ -2.27
NPAS2Q99743 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NPAS2Q99743 SNORD114-7-201ENST00000362520 77 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 Y_RNA.329-201ENST00000365209 107 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 SNORA80D-201ENST00000384488 135 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 Y_RNA.570-201ENST00000384750 101 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms