Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.22□□□□□ -1.89
CALR3Q96L12 SUB1P4-201ENST00000566062 339 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.22□□□□□ -1.89
CALR3Q96L12 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.22□□□□□ -1.89
CALR3Q96L12 AC027279.3-201ENST00000625055 122 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CALR3Q96L12 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CALR3Q96L12 RNU6-309P-201ENST00000364573 106 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 RNU6-163P-201ENST00000384396 106 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 RNU2-7P-201ENST00000410794 178 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 RNU7-25P-201ENST00000516544 62 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 AC107016.2-201ENST00000547968 190 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 MIR4446-201ENST00000578505 67 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 RPL12P50-201ENST00000603116 116 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 MIR6810-201ENST00000622701 70 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CALR3Q96L12 MTND5P32-201ENST00000560711 1802 ntBASIC3.21□□□□□ -1.9
CALR3Q96L12 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
CALR3Q96L12 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CALR3Q96L12 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CALR3Q96L12 MIRLET7C-201ENST00000362160 84 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 RNU1-51P-201ENST00000365345 176 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 Y_RNA.410-201ENST00000383992 113 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 Y_RNA.563-201ENST00000384707 108 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.2□□□□□ -1.9
CALR3Q96L12 AC006028.1-201ENST00000438379 402 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 RN7SL293P-201ENST00000481765 281 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.2□□□□□ -1.9
CALR3Q96L12 RNU5E-3P-201ENST00000515913 68 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 RNU1-45P-201ENST00000517191 141 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 U1.36-201ENST00000620684 176 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.2□□□□□ -1.9
CALR3Q96L12 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CALR3Q96L12 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CALR3Q96L12 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CALR3Q96L12 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CALR3Q96L12 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.19□□□□□ -1.9
CALR3Q96L12 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 SNORD115-28-201ENST00000363931 81 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 RNU1-52P-201ENST00000384190 164 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 Y_RNA.547-201ENST00000384654 119 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 MIR200C-201ENST00000384980 68 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 SNORD88.1-201ENST00000408684 91 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 Y_RNA.712-201ENST00000517011 92 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 RNU6-1116P-201ENST00000517269 99 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 AC004486.1-201ENST00000546846 233 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 AC007336.1-201ENST00000576365 3828 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 FO624990.1-201ENST00000636373 85 ntBASIC3.19□□□□□ -1.9
CALR3Q96L12 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.19□□□□□ -1.9
CALR3Q96L12 RNU6-834P-201ENST00000362367 110 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 RNU6-647P-201ENST00000364243 107 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 SNORA4.2-201ENST00000365313 147 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 MIR490-201ENST00000384865 128 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.18□□□□□ -1.9
CALR3Q96L12 RNU6-1149P-201ENST00000516810 97 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 MIR5197-201ENST00000583721 112 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.18□□□□□ -1.9
CALR3Q96L12 AL022345.2-201ENST00000606307 135 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
CALR3Q96L12 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CALR3Q96L12 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
CALR3Q96L12 RNU6-508P-201ENST00000363231 103 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 RNU6-112P-201ENST00000363599 104 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 SNORA3A-201ENST00000364113 130 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 Y_RNA.353-201ENST00000365440 108 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 SNORD38C-201ENST00000384381 69 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 RNU6-1031P-201ENST00000384773 107 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 MIR181B1-201ENST00000385240 110 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 CALM2P4-201ENST00000430810 426 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 RPS29P6-201ENST00000438196 145 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.17□□□□□ -1.9
CALR3Q96L12 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.17□□□□□ -1.9
CALR3Q96L12 RN7SL542P-201ENST00000467147 294 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 RPL23AP63-201ENST00000498752 471 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 RNA5SP236-201ENST00000516169 116 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
CALR3Q96L12 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
CALR3Q96L12 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.16□□□□□ -1.9
CALR3Q96L12 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CALR3Q96L12 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CALR3Q96L12 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 RNU6-1189P-201ENST00000383958 107 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 Y_RNA.525-201ENST00000384570 113 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 RNU6-296P-201ENST00000384608 107 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
CALR3Q96L12 RNU6-772P-201ENST00000516042 105 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 SNORA31.25-201ENST00000517242 134 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 RNA5SP437-201ENST00000517249 129 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 MIR4529-201ENST00000578110 78 ntBASIC3.16□□□□□ -1.9
CALR3Q96L12 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CALR3Q96L12 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.16□□□□□ -1.9
CALR3Q96L12 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CALR3Q96L12 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CALR3Q96L12 SNORA63.1-201ENST00000362493 131 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 Y_RNA.37-201ENST00000362606 108 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 RNU6-424P-201ENST00000384367 105 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 U8.16-201ENST00000391279 133 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 AL445646.1-201ENST00000431784 216 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 RNA5SP168-201ENST00000516642 112 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms