Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Y_RNA.410-201ENST00000383992 113 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 MIR1302-4-201ENST00000408701 150 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 CST2P1-201ENST00000425770 87 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 AC009238.1-201ENST00000442165 424 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 AC009237.6-201ENST00000446969 424 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 RPS26P48-201ENST00000491713 339 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 AL163195.1-201ENST00000496941 348 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 AC091544.4-201ENST00000555268 342 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 MIR5197-201ENST00000583721 112 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 AC009831.4-201ENST00000620744 325 ntBASIC3.24□□□□□ -1.89
IFT43Q96FT9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.24□□□□□ -1.89
IFT43Q96FT9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
IFT43Q96FT9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
IFT43Q96FT9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
IFT43Q96FT9 Y_RNA.49-201ENST00000362714 112 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 Y_RNA.163-201ENST00000363702 113 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 RNU6-756P-201ENST00000383997 107 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 MIR518F-201ENST00000384973 87 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 MIR802-201ENST00000390235 94 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 SNORA26.7-201ENST00000391288 122 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 MIR1262-201ENST00000408276 93 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 AC104332.2-201ENST00000429959 156 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 RN7SL499P-201ENST00000481141 276 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.23□□□□□ -1.89
IFT43Q96FT9 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 AC134878.1-201ENST00000619901 243 ntBASIC3.23□□□□□ -1.89
IFT43Q96FT9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.23□□□□□ -1.89
IFT43Q96FT9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
IFT43Q96FT9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
IFT43Q96FT9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFT43Q96FT9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFT43Q96FT9 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
IFT43Q96FT9 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
IFT43Q96FT9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFT43Q96FT9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
IFT43Q96FT9 AL589743.1-201ENST00000551932 2712 ntBASIC3.21□□□□□ -1.89
IFT43Q96FT9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFT43Q96FT9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
IFT43Q96FT9 Y_RNA.198-201ENST00000364013 98 ntBASIC3.21□□□□□ -1.9
IFT43Q96FT9 Y_RNA.328-201ENST00000365208 113 ntBASIC3.21□□□□□ -1.9
IFT43Q96FT9 SNORA51.5-201ENST00000384126 131 ntBASIC3.21□□□□□ -1.9
IFT43Q96FT9 RNU6-1113P-201ENST00000384348 107 ntBASIC3.21□□□□□ -1.9
IFT43Q96FT9 Y_RNA.549-201ENST00000384657 102 ntBASIC3.21□□□□□ -1.9
IFT43Q96FT9 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
IFT43Q96FT9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFT43Q96FT9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
IFT43Q96FT9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT43Q96FT9 AC245060.5-201ENST00000610778 3293 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 RNU6-862P-201ENST00000362804 105 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 SNORD68-201ENST00000363214 84 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 RNY4P6-201ENST00000363667 96 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 RNU6-905P-201ENST00000384434 107 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 RNU6-240P-201ENST00000516098 97 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 AC004486.1-201ENST00000546846 233 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 MIR4762-201ENST00000585261 75 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 RNU6-94P-201ENST00000607728 107 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 AC006441.5-201ENST00000612680 209 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 AL162274.2-201ENST00000614406 332 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 AP001318.4-201ENST00000616637 121 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 U4atac.1-201ENST00000618345 95 ntBASIC3.2□□□□□ -1.9
IFT43Q96FT9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IFT43Q96FT9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFT43Q96FT9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.2□□□□□ -1.9
IFT43Q96FT9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFT43Q96FT9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT43Q96FT9 SNORD14E-201ENST00000364009 85 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 RNA5SP493-201ENST00000364115 91 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 Y_RNA.348-201ENST00000365403 103 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 RNU6-1014P-201ENST00000383940 103 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 MIR181B1-201ENST00000385240 110 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 MIR759-201ENST00000390224 91 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.19□□□□□ -1.9
IFT43Q96FT9 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 MIR622-201ENST00000638396 96 ntBASIC3.19□□□□□ -1.9
IFT43Q96FT9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT43Q96FT9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
IFT43Q96FT9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT43Q96FT9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT43Q96FT9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
IFT43Q96FT9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFT43Q96FT9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFT43Q96FT9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFT43Q96FT9 RNU6-1084P-201ENST00000362498 107 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 Y_RNA.213-201ENST00000364178 111 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 Y_RNA.323-201ENST00000365157 109 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 SNORA2.2-201ENST00000365473 135 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 RNU6-1189P-201ENST00000383958 107 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 RNU6-442P-201ENST00000383968 104 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 MIR548O-201ENST00000408583 114 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms