Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SEPT14P17-201ENST00000617978 177 ntBASIC3.95□□□□□ -1.78
PTCD2Q8WV60 U4atac.1-201ENST00000618345 95 ntBASIC3.95□□□□□ -1.78
PTCD2Q8WV60 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PTCD2Q8WV60 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
PTCD2Q8WV60 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTCD2Q8WV60 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 AP000648.3-201ENST00000623539 4507 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 AL606517.2-201ENST00000442855 241 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RN7SL542P-201ENST00000467147 294 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RNA5SP143-201ENST00000516936 115 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RNU6-711P-201ENST00000517255 106 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 AC091167.4-201ENST00000605079 184 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RNU6-90P-201ENST00000606352 106 ntBASIC3.94□□□□□ -1.78
PTCD2Q8WV60 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PTCD2Q8WV60 RNA5SP295-201ENST00000362655 121 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 RNA5SP109-201ENST00000391010 116 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 AC006539.3-201ENST00000454258 129 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 RNU1-98P-201ENST00000458992 160 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCD2Q8WV60 RNA5SP179-201ENST00000517284 121 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 MIR4791-201ENST00000607666 84 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 MIR6717-201ENST00000622747 73 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCD2Q8WV60 GABRG2-229ENST00000641017 3628 ntBASIC3.93□□□□□ -1.78
PTCD2Q8WV60 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCD2Q8WV60 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCD2Q8WV60 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTCD2Q8WV60 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTCD2Q8WV60 RNU6-315P-201ENST00000362666 107 ntBASIC3.92□□□□□ -1.78
PTCD2Q8WV60 SNORA26.6-201ENST00000391256 115 ntBASIC3.92□□□□□ -1.78
PTCD2Q8WV60 MIR548G-201ENST00000408442 89 ntBASIC3.92□□□□□ -1.78
PTCD2Q8WV60 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.92□□□□□ -1.78
PTCD2Q8WV60 AC140658.3-201ENST00000567603 271 ntBASIC3.92□□□□□ -1.78
PTCD2Q8WV60 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTCD2Q8WV60 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 RNA5SP139-201ENST00000364340 117 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 MIR206-201ENST00000384872 86 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 RN7SKP111-201ENST00000410349 271 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 SPINT5P-201ENST00000448174 155 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 RPS29P29-201ENST00000456396 171 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 AC023141.11-201ENST00000508864 202 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 RNU6-826P-201ENST00000516827 104 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 RNU1-45P-201ENST00000517191 141 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 AC023632.4-201ENST00000517783 191 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 AC005000.2-201ENST00000605468 310 ntBASIC3.91□□□□□ -1.78
PTCD2Q8WV60 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PTCD2Q8WV60 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.9□□□□□ -1.78
PTCD2Q8WV60 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.78
PTCD2Q8WV60 RNU6-865P-201ENST00000364772 107 ntBASIC3.9□□□□□ -1.79
PTCD2Q8WV60 MIR34C-201ENST00000384831 77 ntBASIC3.9□□□□□ -1.79
PTCD2Q8WV60 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD2Q8WV60 SNORA84-201ENST00000459229 133 ntBASIC3.9□□□□□ -1.79
PTCD2Q8WV60 AC090255.1-201ENST00000495779 349 ntBASIC3.9□□□□□ -1.79
PTCD2Q8WV60 MIR8054-201ENST00000620877 86 ntBASIC3.9□□□□□ -1.79
PTCD2Q8WV60 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCD2Q8WV60 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 MIRLET7C-201ENST00000362160 84 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 RNU6-1094P-201ENST00000362416 104 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 RNA5SP124-201ENST00000362739 110 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 RNA5SP97-201ENST00000365006 84 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 RNU6-1072P-201ENST00000384703 107 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 RNU6-443P-201ENST00000384780 107 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 MIR30B-201ENST00000384850 88 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 RNA5SP164-201ENST00000516533 110 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 SCARNA14-201ENST00000516903 136 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 MIR5685-201ENST00000579080 79 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 AL137849.1-201ENST00000604767 169 ntBASIC3.89□□□□□ -1.79
PTCD2Q8WV60 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms