Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR1248-201ENST00000629190 106 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SYNE4Q8N205 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.57□□□□□ -2
SYNE4Q8N205 ZNF355P-201ENST00000427301 3216 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 MIR367-201ENST00000362299 68 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 RNA5SP205-201ENST00000364653 136 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 RNU6-1180P-201ENST00000364935 107 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 RNU6-418P-201ENST00000384035 107 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 RNU6-975P-201ENST00000384296 105 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 MIR499A-201ENST00000384903 122 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 SNORA40.18-201ENST00000391200 128 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 AL512604.1-201ENST00000404812 257 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 MIR1294-201ENST00000408503 142 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 RPL30P13-201ENST00000418873 348 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 RNU6-221P-201ENST00000459541 99 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
SYNE4Q8N205 SNORA70.12-201ENST00000516084 153 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 AC127455.1-201ENST00000565496 145 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 AL391516.1-201ENST00000554380 2449 ntBASIC2.57□□□□□ -2
SYNE4Q8N205 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SYNE4Q8N205 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
SYNE4Q8N205 MIR337-201ENST00000362281 93 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 Y_RNA.127-201ENST00000363386 109 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 MIR513C-201ENST00000401352 84 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 RNU6-588P-201ENST00000410281 105 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 RNU6-321P-201ENST00000410912 106 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 CYP2C59P-201ENST00000457790 269 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
SYNE4Q8N205 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 AP003357.1-201ENST00000604497 148 ntBASIC2.56□□□□□ -2
SYNE4Q8N205 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.56□□□□□ -2
SYNE4Q8N205 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SYNE4Q8N205 MIR378A-201ENST00000362177 66 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 SNORD45.3-201ENST00000363836 72 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RNU6-1082P-201ENST00000364574 107 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 Y_RNA.337-201ENST00000365312 102 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RNU6-1228P-201ENST00000391014 107 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 SNORA48.3-201ENST00000391081 134 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 AC019129.1-201ENST00000403786 261 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RNA5SP511-201ENST00000410487 115 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RNU2-48P-201ENST00000410694 191 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 HSPE1P13-201ENST00000451143 297 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 MIR5089-201ENST00000580047 84 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 MIR4753-201ENST00000585119 83 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 POLR3GP1-201ENST00000594073 261 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RPL17P51-201ENST00000605218 238 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
SYNE4Q8N205 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SYNE4Q8N205 RNU6-199P-201ENST00000362954 107 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 Y_RNA.796-201ENST00000364268 102 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 Y_RNA.251-201ENST00000364551 99 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 Y_RNA.294-201ENST00000364916 102 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 Y_RNA.799-201ENST00000364992 102 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 RNU6-215P-201ENST00000365169 102 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 RNU6-117P-201ENST00000365415 107 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 RNU6-144P-201ENST00000383951 107 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 RNU6-546P-201ENST00000383991 107 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 RNU6-136P-201ENST00000384663 107 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 SNORD37.2-201ENST00000391075 66 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 RNU2-63P-201ENST00000410792 194 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 AC008267.6-201ENST00000441664 139 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 SNRPGP8-201ENST00000454064 226 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 AC018868.1-201ENST00000491307 315 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.54□□□□□ -2
SYNE4Q8N205 RNA5SP20-201ENST00000515976 84 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 AC025647.1-201ENST00000517879 253 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 AC015720.1-201ENST00000565251 277 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 AL355297.2-201ENST00000604792 129 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
SYNE4Q8N205 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
SYNE4Q8N205 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SYNE4Q8N205 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.53□□□□□ -2
SYNE4Q8N205 SNORD116-14-201ENST00000383894 92 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 SNORD116-17-201ENST00000383929 92 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 RNU6-1323P-201ENST00000384025 107 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 RNU6-44P-201ENST00000384045 107 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 SNORD116-15-201ENST00000384445 92 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 SNORD116-19-201ENST00000384729 92 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 MIR300-201ENST00000401138 83 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 Y_RNA.629-201ENST00000411368 105 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 AC003989.2-201ENST00000440224 169 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 AC010531.2-201ENST00000465012 153 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 RPL23AP54-201ENST00000495129 419 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 RNA5SP182-201ENST00000516064 82 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 AL929325.1-201ENST00000603096 117 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 AC120024.3-201ENST00000603167 156 ntBASIC2.53□□□□□ -2
SYNE4Q8N205 AL021707.8-201ENST00000609428 183 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms