Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 USP9YP30-201ENST00000430729 455 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.33□□□□□ -2.46
ABCA4P78363 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU7-104P-201ENST00000459398 79 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 MTCO1P29-201ENST00000496868 288 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 SNORA40.12-201ENST00000516329 111 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU6-58P-201ENST00000517143 103 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 MTND2P38-201ENST00000522536 667 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AL358944.1-201ENST00000528537 144 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 MIR4263-201ENST00000584745 83 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 MIR4762-201ENST00000585261 75 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC008608.1-201ENST00000603910 127 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC002044.1-201ENST00000606707 158 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC010999.1-201ENST00000611856 324 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AL121895.2-201ENST00000619558 447 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 U6.109-201ENST00000636749 87 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC005592.1-201ENST00000566527 1640 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 MIR9-2-201ENST00000384838 87 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 SNORA26.6-201ENST00000391256 115 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC092447.3-201ENST00000426027 686 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 USP9YP16-201ENST00000430287 407 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC004386.2-201ENST00000441858 148 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AL353572.1-201ENST00000442490 417 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 USP9YP23-201ENST00000455085 407 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU7-55P-201ENST00000459426 62 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RPL39P34-201ENST00000477141 156 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC116562.3-201ENST00000506136 177 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC105417.1-201ENST00000514691 285 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC140658.3-201ENST00000567603 271 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AP001542.1-201ENST00000591314 200 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AP000907.4-201ENST00000604143 237 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AL133215.3-201ENST00000609801 448 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 MIR8068-201ENST00000618032 68 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 SNORD38B-202ENST00000625943 69 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNY4P27-201ENST00000363341 96 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 SNORD87-201ENST00000364849 89 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR517B-201ENST00000385102 67 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR876-201ENST00000401147 81 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 SNORD110-201ENST00000408189 75 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR320B2-201ENST00000408479 138 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 RNU6-721P-201ENST00000410155 105 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.34□□□□□ -2.46
ABCA4P78363 MTCO2P3-201ENST00000442543 421 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AC097510.1-201ENST00000510945 133 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MTATP6P15-201ENST00000527233 835 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR4324-201ENST00000584846 72 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AL359999.1-201ENST00000604513 294 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AC022306.3-201ENST00000619930 550 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 SNORA43.4-201ENST00000629559 138 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 RNU4-84P-201ENST00000364200 139 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 RNY4P7-201ENST00000364600 96 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIRLET7B-201ENST00000385140 83 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR802-201ENST00000390235 94 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 SNORD75.2-201ENST00000408784 58 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 SNORD93-201ENST00000408813 74 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.34□□□□□ -2.46
ABCA4P78363 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.34□□□□□ -2.46
ABCA4P78363 AL512286.1-201ENST00000439244 400 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MTCO3P8-201ENST00000453691 755 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MTND1P11-201ENST00000456661 876 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 PRDX4P1-201ENST00000507189 574 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.34□□□□□ -2.46
ABCA4P78363 MTND1P5-201ENST00000517906 940 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 DEFB131E-201ENST00000532329 154 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR4752-201ENST00000579672 72 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AC012433.1-201ENST00000588916 398 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AL356055.1-201ENST00000602528 446 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR6738-201ENST00000619620 64 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 AL049777.1-201ENST00000622740 518 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 MIR6828-201ENST00000636181 60 ntBASIC-0.34□□□□□ -2.46
ABCA4P78363 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-784P-201ENST00000384330 106 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 SNORD73A-201ENST00000386062 65 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AL008987.1-201ENST00000415528 237 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.35□□□□□ -2.47
ABCA4P78363 RPS27AP14-201ENST00000422868 454 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC022137.1-201ENST00000483735 151 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-848P-201ENST00000515948 107 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-617P-201ENST00000516147 107 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-473P-201ENST00000516164 107 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms