Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AL449363.1-201ENST00000617815 186 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 AL590808.1-201ENST00000618696 141 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 MIR6079-201ENST00000635807 62 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SLC6A11P48066 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SLC6A11P48066 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
SLC6A11P48066 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC6A11P48066 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A11P48066 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 SNORD115-3-201ENST00000363100 82 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 Y_RNA.253-201ENST00000364562 112 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 SNORA8-201ENST00000384574 139 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 SNORA26-201ENST00000391286 122 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC6A11P48066 SNRPGP10-201ENST00000432323 225 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC6A11P48066 HMGN1P7-201ENST00000491722 313 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC6A11P48066 SNORD53-201ENST00000579969 78 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
SLC6A11P48066 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.64□□□□□ -1.99
SLC6A11P48066 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A11P48066 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SLC6A11P48066 SNORD114-30-201ENST00000364448 72 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 Y_RNA.294-201ENST00000364916 102 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 U8.9-201ENST00000365667 134 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 MLLT10P1-201ENST00000418346 262 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC6A11P48066 UBL5P3-201ENST00000475112 231 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 RNU1-41P-201ENST00000516161 162 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 RNU1-48P-201ENST00000516400 162 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 NDUFA5P6-201ENST00000542110 379 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 MIR4662B-201ENST00000579498 81 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 AC091178.2-201ENST00000584401 117 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.63□□□□□ -1.99
SLC6A11P48066 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC6A11P48066 AC018630.2-201ENST00000534866 2403 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
SLC6A11P48066 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC6A11P48066 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC6A11P48066 U8.1-201ENST00000362843 134 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 Y_RNA.81-201ENST00000362997 102 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 Y_RNA.486-201ENST00000384398 107 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 MIR27B-201ENST00000385129 97 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SLC6A11P48066 SNORA26.7-201ENST00000391288 122 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
SLC6A11P48066 NDUFA4P2-201ENST00000489989 244 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 RPPH1-2P-201ENST00000516688 293 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 RNU6-365P-201ENST00000517113 106 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 Y_RNA.757-201ENST00000578934 114 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 AC022217.4-201ENST00000604389 163 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 AL353149.1-201ENST00000610667 244 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 U4atac.1-201ENST00000618345 95 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
SLC6A11P48066 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SLC6A11P48066 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU6-235P-201ENST00000362644 107 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 Y_RNA.273-201ENST00000364703 102 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU6-1138P-201ENST00000365359 106 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 SNORD20-201ENST00000384550 80 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU1-131P-201ENST00000458943 161 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU7-107P-201ENST00000459121 61 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 MRPS17P9-201ENST00000511924 393 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU5E-3P-201ENST00000515913 68 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU6-126P-201ENST00000516685 103 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 RNU6-341P-201ENST00000516973 96 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 AC097639.2-201ENST00000603159 172 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 CTSLP2-204ENST00000629029 392 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 U6.108-201ENST00000637764 58 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SLC6A11P48066 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SLC6A11P48066 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
SLC6A11P48066 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SLC6A11P48066 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SLC6A11P48066 MIR126-201ENST00000362291 85 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 RNU6-862P-201ENST00000362804 105 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 RNU6-23P-201ENST00000363283 107 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 Y_RNA.525-201ENST00000384570 113 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC6A11P48066 SNORA18.4-201ENST00000516440 124 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC6A11P48066 AC131055.1-201ENST00000584626 316 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 AC064859.1-201ENST00000624741 174 ntBASIC2.6□□□□□ -1.99
SLC6A11P48066 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SLC6A11P48066 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC6A11P48066 Y_RNA.353-201ENST00000365440 108 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 SNORD18B-201ENST00000365659 72 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 SNORD72-201ENST00000390994 80 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 AL117342.1-201ENST00000404861 406 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC6A11P48066 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 RNU7-26P-201ENST00000458980 63 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 225.9 ms