Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 Y_RNA.319-201ENST00000365138 92 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 Y_RNA.441-201ENST00000384123 112 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 RNU6-281P-201ENST00000384212 103 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXC13P31276 HSPE1P21-201ENST00000438283 308 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 SNORD2.1-201ENST00000458762 69 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.91□□□□□ -2.1
HOXC13P31276 SNORA40.9-201ENST00000515895 93 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 RNU6-313P-201ENST00000516317 112 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC13P31276 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.91□□□□□ -2.1
HOXC13P31276 AC055872.1-201ENST00000570978 278 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 MIR3145-201ENST00000580727 82 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 AC108706.1-201ENST00000611053 297 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
HOXC13P31276 AC100821.1-201ENST00000523153 2479 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC13P31276 Y_RNA.118-201ENST00000363300 101 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 Y_RNA.262-201ENST00000364641 102 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 Y_RNA.343-201ENST00000365354 112 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 MIR329-1-201ENST00000385028 80 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 MIR300-201ENST00000401138 83 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 AC016925.1-201ENST00000458303 298 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 RNVU1-2-201ENST00000516326 135 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 RNU6-966P-201ENST00000516479 104 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 AC005176.2-201ENST00000596933 147 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 AL357075.2-201ENST00000614906 189 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 AC005562.2-201ENST00000618264 111 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 snoU18.1-201ENST00000629629 71 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 ZNF204P-201ENST00000416749 2397 ntBASIC1.9□□□□□ -2.11
HOXC13P31276 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HOXC13P31276 RNU4-80P-201ENST00000363200 141 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.136-201ENST00000363444 102 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.217-201ENST00000364214 105 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.355-201ENST00000365462 98 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 RNU6-449P-201ENST00000383914 107 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 RNU6-211P-201ENST00000384047 107 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.435-201ENST00000384095 112 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 RNU6-1145P-201ENST00000384246 107 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.488-201ENST00000384403 102 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.568-201ENST00000384742 113 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.580-201ENST00000391004 95 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 RNU6-159P-201ENST00000391080 106 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 MIR320B2-201ENST00000408479 138 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 AC004386.2-201ENST00000441858 148 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 Y_RNA.641-201ENST00000459414 105 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC13P31276 RNU6-479P-201ENST00000516348 105 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 RNU6-58P-201ENST00000517143 103 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC13P31276 SNRPGP20-201ENST00000604477 205 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 MIR8074-201ENST00000615081 81 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 TCL6_2.1-201ENST00000615162 119 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 MTND1P7-201ENST00000632801 297 ntBASIC1.89□□□□□ -2.11
HOXC13P31276 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC13P31276 RNU6-653P-201ENST00000363074 106 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 SNORA72.2-201ENST00000365028 127 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 Y_RNA.400-201ENST00000383963 111 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 SNORD20-201ENST00000384550 80 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 Y_RNA.571-201ENST00000384753 98 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 MIR549A-201ENST00000385268 96 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 RNU6-1168P-201ENST00000390831 104 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 AL390729.2-201ENST00000416137 156 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 AL162725.1-201ENST00000435405 301 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 MTCO1P44-201ENST00000441935 243 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC13P31276 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC13P31276 RNU6-426P-201ENST00000516464 97 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 SNORD116-25-201ENST00000516517 92 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 SUMO2P18-201ENST00000518873 252 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC13P31276 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC13P31276 MIR5006-201ENST00000583027 110 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 RNU2-4P-201ENST00000606190 192 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 AL159152.1-201ENST00000635019 2587 ntBASIC1.88□□□□□ -2.11
HOXC13P31276 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXC13P31276 MIR340-201ENST00000362125 95 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 Y_RNA.101-201ENST00000363154 102 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 RNU6-151P-201ENST00000364158 107 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 Y_RNA.215-201ENST00000364204 112 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 Y_RNA.230-201ENST00000364348 109 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 Y_RNA.261-201ENST00000364631 102 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 Y_RNA.586-201ENST00000391146 98 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 EBAG9P1-201ENST00000418955 543 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 BTF3P11-201ENST00000426582 477 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 SEPT7P4-201ENST00000437076 306 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 AC007215.1-201ENST00000464893 276 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 RNU6-191P-201ENST00000516295 94 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
HOXC13P31276 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms