Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RNU6-855P-201ENST00000410395 104 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 RN7SKP51-201ENST00000410781 304 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 POLR2KP2-201ENST00000438155 177 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 Y_RNA.638-201ENST00000459374 113 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 AL049830.1-201ENST00000468034 425 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 RNA5SP458-201ENST00000516188 119 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 RNU6-764P-201ENST00000516396 105 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 RNU7-116P-201ENST00000516940 62 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 AL078604.3-201ENST00000615580 211 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
PTPN3P26045 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
PTPN3P26045 Y_RNA.214-201ENST00000364201 112 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 U8.5-201ENST00000364528 136 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 Y_RNA.286-201ENST00000364813 102 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 Y_RNA.341-201ENST00000365341 102 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 SNORA72-201ENST00000384339 132 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 RNU6-121P-201ENST00000410525 99 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
PTPN3P26045 AL135790.2-201ENST00000437701 267 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.41□□□□□ -2.18
PTPN3P26045 MTND4LP30-201ENST00000454092 297 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 SNORA40.15-201ENST00000516884 107 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.41□□□□□ -2.18
PTPN3P26045 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 MIR4762-201ENST00000585261 75 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 AL512598.1-201ENST00000610158 273 ntBASIC1.41□□□□□ -2.18
PTPN3P26045 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.41□□□□□ -2.18
PTPN3P26045 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
PTPN3P26045 MIRLET7C-201ENST00000362160 84 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 Y_RNA.105-201ENST00000363182 111 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 RNU6-770P-201ENST00000363929 105 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 AC113618.1-201ENST00000416747 285 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 ELOCP20-201ENST00000422460 345 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 RPL30P7-201ENST00000479312 323 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.4□□□□□ -2.19
PTPN3P26045 AC011604.1-201ENST00000545978 196 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 AP003357.1-201ENST00000604497 148 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 AC099654.10-201ENST00000640395 161 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.19
PTPN3P26045 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PTPN3P26045 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.210-201ENST00000364161 110 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 RNU4-41P-201ENST00000364426 143 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 RNU6-290P-201ENST00000365212 101 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.418-201ENST00000384029 102 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 RNU6-102P-201ENST00000384485 104 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AL590004.1-201ENST00000405321 300 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.39□□□□□ -2.19
PTPN3P26045 Z98949.2-201ENST00000440996 144 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AL731563.1-201ENST00000442202 214 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 LINC01399-202ENST00000458450 244 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.39□□□□□ -2.19
PTPN3P26045 RNA5SP168-201ENST00000516642 112 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AL161670.1-201ENST00000554348 137 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AL353621.2-201ENST00000605340 133 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AL365434.2-201ENST00000607979 234 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.812-201ENST00000610788 101 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.784-201ENST00000613803 101 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.787-201ENST00000616522 101 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.780-201ENST00000617336 101 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 AC007742.2-201ENST00000618226 398 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 Y_RNA.801-201ENST00000619005 101 ntBASIC1.39□□□□□ -2.19
PTPN3P26045 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PTPN3P26045 SNORA63-201ENST00000363450 132 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 RNU6-1105P-201ENST00000384774 107 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 Y_RNA.621-201ENST00000411065 96 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 CALM2P4-201ENST00000430810 426 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 RPL39P38-201ENST00000467018 153 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 AC136628.3-201ENST00000521868 290 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.38□□□□□ -2.19
PTPN3P26045 MIR3145-201ENST00000580727 82 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 AC027279.3-201ENST00000625055 122 ntBASIC1.38□□□□□ -2.19
PTPN3P26045 Y_RNA.19-201ENST00000362462 99 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 Y_RNA.26-201ENST00000362539 101 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 RNU4-80P-201ENST00000363200 141 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 Y_RNA.140-201ENST00000363474 103 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 RNU6-806P-201ENST00000365147 105 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 AC108667.1-201ENST00000428618 249 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 MRPS35P2-201ENST00000508242 191 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 RNU6-191P-201ENST00000516295 94 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 SCARNA15.1-201ENST00000516384 125 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 RNU7-115P-201ENST00000516433 55 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 AC127455.1-201ENST00000565496 145 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
PTPN3P26045 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.37□□□□□ -2.19
PTPN3P26045 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.37□□□□□ -2.19
PTPN3P26045 snoU2_19.2-201ENST00000363024 80 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 Y_RNA.253-201ENST00000364562 112 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 SNORA63C-201ENST00000364578 129 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 RNU6-326P-201ENST00000365480 107 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 RNU6-1160P-201ENST00000384546 104 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 Y_RNA.569-201ENST00000384749 103 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 MIR606-201ENST00000384851 96 ntBASIC1.36□□□□□ -2.19
PTPN3P26045 MIR653-201ENST00000385279 96 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms