Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
MMP3P08254 UBE2WP1-201ENST00000362030 340 ntBASIC1.9□□□□□ -2.11
MMP3P08254 Y_RNA.269-201ENST00000364685 89 ntBASIC1.9□□□□□ -2.11
MMP3P08254 SNORA72.4-201ENST00000384174 132 ntBASIC1.9□□□□□ -2.11
MMP3P08254 SNORA48.1-201ENST00000390879 135 ntBASIC1.9□□□□□ -2.11
MMP3P08254 Y_RNA.590-201ENST00000410140 107 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.9□□□□□ -2.11
MMP3P08254 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AC104332.1-201ENST00000440471 797 ntBASIC1.9□□□□□ -2.11
MMP3P08254 HSPE1P13-201ENST00000451143 297 ntBASIC1.9□□□□□ -2.11
MMP3P08254 RNU7-141P-201ENST00000459304 62 ntBASIC1.9□□□□□ -2.11
MMP3P08254 RNU6-1023P-201ENST00000516137 106 ntBASIC1.9□□□□□ -2.11
MMP3P08254 RNU7-99P-201ENST00000516271 62 ntBASIC1.9□□□□□ -2.11
MMP3P08254 RNU6-1291P-201ENST00000516591 104 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AC136628.3-201ENST00000521868 290 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AL162424.1-201ENST00000602325 221 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
MMP3P08254 MIR8070-201ENST00000616510 88 ntBASIC1.9□□□□□ -2.11
MMP3P08254 AP000553.5-201ENST00000641933 54 ntBASIC1.9□□□□□ -2.11
MMP3P08254 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MMP3P08254 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
MMP3P08254 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MMP3P08254 SNORD114-7-201ENST00000362520 77 ntBASIC1.89□□□□□ -2.11
MMP3P08254 RNU4-13P-201ENST00000364019 141 ntBASIC1.89□□□□□ -2.11
MMP3P08254 Y_RNA.267-201ENST00000364679 109 ntBASIC1.89□□□□□ -2.11
MMP3P08254 U8.7-201ENST00000364940 136 ntBASIC1.89□□□□□ -2.11
MMP3P08254 Y_RNA.456-201ENST00000384232 111 ntBASIC1.89□□□□□ -2.11
MMP3P08254 RNU6-1248P-201ENST00000391096 64 ntBASIC1.89□□□□□ -2.11
MMP3P08254 RPS4XP11-201ENST00000446897 772 ntBASIC1.89□□□□□ -2.11
MMP3P08254 Y_RNA.679-201ENST00000516416 91 ntBASIC1.89□□□□□ -2.11
MMP3P08254 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.89□□□□□ -2.11
MMP3P08254 CBX3P4-201ENST00000538909 354 ntBASIC1.89□□□□□ -2.11
MMP3P08254 AC005357.1-201ENST00000588399 301 ntBASIC1.89□□□□□ -2.11
MMP3P08254 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
MMP3P08254 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.89□□□□□ -2.11
MMP3P08254 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
MMP3P08254 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MMP3P08254 Y_RNA.20-201ENST00000362479 113 ntBASIC1.88□□□□□ -2.11
MMP3P08254 RNU4-10P-201ENST00000364383 140 ntBASIC1.88□□□□□ -2.11
MMP3P08254 RNU6-211P-201ENST00000384047 107 ntBASIC1.88□□□□□ -2.11
MMP3P08254 Y_RNA.476-201ENST00000384347 108 ntBASIC1.88□□□□□ -2.11
MMP3P08254 Y_RNA.489-201ENST00000384410 101 ntBASIC1.88□□□□□ -2.11
MMP3P08254 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
MMP3P08254 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP3P08254 AL162725.1-201ENST00000435405 301 ntBASIC1.88□□□□□ -2.11
MMP3P08254 AC233266.1-201ENST00000454518 96 ntBASIC1.88□□□□□ -2.11
MMP3P08254 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
MMP3P08254 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.88□□□□□ -2.11
MMP3P08254 MIR4287-201ENST00000579398 78 ntBASIC1.88□□□□□ -2.11
MMP3P08254 AC022217.4-201ENST00000604389 163 ntBASIC1.88□□□□□ -2.11
MMP3P08254 AC242852.1-201ENST00000612151 96 ntBASIC1.88□□□□□ -2.11
MMP3P08254 AC244015.1-201ENST00000622301 99 ntBASIC1.88□□□□□ -2.11
MMP3P08254 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
MMP3P08254 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MMP3P08254 ZNF702P-202ENST00000434269 1966 ntBASIC1.88□□□□□ -2.11
MMP3P08254 Y_RNA.122-201ENST00000363331 96 ntBASIC1.87□□□□□ -2.11
MMP3P08254 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MMP3P08254 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
MMP3P08254 RNA5SP57-201ENST00000459463 123 ntBASIC1.87□□□□□ -2.11
MMP3P08254 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
MMP3P08254 AC024405.2-202ENST00000532731 184 ntBASIC1.87□□□□□ -2.11
MMP3P08254 DNAJC19P9-201ENST00000555084 351 ntBASIC1.87□□□□□ -2.11
MMP3P08254 AC005972.2-201ENST00000604690 348 ntBASIC1.87□□□□□ -2.11
MMP3P08254 BX284668.6-201ENST00000606899 438 ntBASIC1.87□□□□□ -2.11
MMP3P08254 MIR548AY-201ENST00000617669 107 ntBASIC1.87□□□□□ -2.11
MMP3P08254 MIR6079-201ENST00000635807 62 ntBASIC1.87□□□□□ -2.11
MMP3P08254 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MMP3P08254 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
MMP3P08254 Y_RNA.118-201ENST00000363300 101 ntBASIC1.86□□□□□ -2.11
MMP3P08254 SNORA25.9-201ENST00000365087 128 ntBASIC1.86□□□□□ -2.11
MMP3P08254 SNORA4.2-201ENST00000365313 147 ntBASIC1.86□□□□□ -2.11
MMP3P08254 MT-TG-201ENST00000387429 68 ntBASIC1.86□□□□□ -2.11
MMP3P08254 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.86□□□□□ -2.11
MMP3P08254 Y_RNA.621-201ENST00000411065 96 ntBASIC1.86□□□□□ -2.11
MMP3P08254 RPS27P1-201ENST00000450552 247 ntBASIC1.86□□□□□ -2.11
MMP3P08254 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
MMP3P08254 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.86□□□□□ -2.11
MMP3P08254 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.86□□□□□ -2.11
MMP3P08254 RNA5SP437-201ENST00000517249 129 ntBASIC1.86□□□□□ -2.11
MMP3P08254 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
MMP3P08254 POLR3GP1-201ENST00000594073 261 ntBASIC1.86□□□□□ -2.11
MMP3P08254 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.86□□□□□ -2.11
MMP3P08254 AC018630.2-201ENST00000534866 2403 ntBASIC1.86□□□□□ -2.11
MMP3P08254 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
MMP3P08254 RNU6-1019P-201ENST00000364424 107 ntBASIC1.85□□□□□ -2.11
MMP3P08254 RNU6-1080P-201ENST00000383982 107 ntBASIC1.85□□□□□ -2.11
MMP3P08254 Y_RNA.478-201ENST00000384358 107 ntBASIC1.85□□□□□ -2.11
MMP3P08254 Y_RNA.508-201ENST00000384502 114 ntBASIC1.85□□□□□ -2.11
MMP3P08254 MIR515-2-201ENST00000384883 83 ntBASIC1.85□□□□□ -2.11
MMP3P08254 MIR515-1-201ENST00000384884 83 ntBASIC1.85□□□□□ -2.11
MMP3P08254 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
MMP3P08254 MTND2P29-201ENST00000438595 412 ntBASIC1.85□□□□□ -2.11
MMP3P08254 HSPE1P9-201ENST00000440046 311 ntBASIC1.85□□□□□ -2.11
MMP3P08254 RPL23AP54-201ENST00000495129 419 ntBASIC1.85□□□□□ -2.11
MMP3P08254 RNU7-115P-201ENST00000516433 55 ntBASIC1.85□□□□□ -2.11
MMP3P08254 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
MMP3P08254 SUB1P4-201ENST00000566062 339 ntBASIC1.85□□□□□ -2.11
MMP3P08254 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
MMP3P08254 AC091178.2-201ENST00000584401 117 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms