Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SYPP08247 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SYPP08247 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SYPP08247 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SYPP08247 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SYPP08247 Y_RNA.52-201ENST00000362760 96 ntBASIC2.78□□□□□ -1.96
SYPP08247 SNORD18B-201ENST00000365659 72 ntBASIC2.78□□□□□ -1.96
SYPP08247 RNY4P18-201ENST00000391107 89 ntBASIC2.78□□□□□ -1.96
SYPP08247 MIR891A-201ENST00000401237 79 ntBASIC2.78□□□□□ -1.96
SYPP08247 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
SYPP08247 AL117342.1-201ENST00000404861 406 ntBASIC2.78□□□□□ -1.96
SYPP08247 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.78□□□□□ -1.96
SYPP08247 AC018634.1-201ENST00000437554 401 ntBASIC2.78□□□□□ -1.96
SYPP08247 RNU1-131P-201ENST00000458943 161 ntBASIC2.78□□□□□ -1.96
SYPP08247 SNORA18.4-201ENST00000516440 124 ntBASIC2.78□□□□□ -1.96
SYPP08247 RNU6-504P-201ENST00000516568 104 ntBASIC2.78□□□□□ -1.96
SYPP08247 AL358944.1-201ENST00000528537 144 ntBASIC2.78□□□□□ -1.96
SYPP08247 U6.95-201ENST00000636931 70 ntBASIC2.78□□□□□ -1.96
SYPP08247 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SYPP08247 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.77□□□□□ -1.97
SYPP08247 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYPP08247 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SYPP08247 RNU6-508P-201ENST00000363231 103 ntBASIC2.77□□□□□ -1.97
SYPP08247 SNORA33-201ENST00000363664 130 ntBASIC2.77□□□□□ -1.97
SYPP08247 RNU6-309P-201ENST00000364573 106 ntBASIC2.77□□□□□ -1.97
SYPP08247 SNORA12.1-201ENST00000390873 148 ntBASIC2.77□□□□□ -1.97
SYPP08247 RNA5SP21-201ENST00000410917 96 ntBASIC2.77□□□□□ -1.97
SYPP08247 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
SYPP08247 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.77□□□□□ -1.97
SYPP08247 UBL5P3-201ENST00000475112 231 ntBASIC2.77□□□□□ -1.97
SYPP08247 AC096725.1-201ENST00000514266 313 ntBASIC2.77□□□□□ -1.97
SYPP08247 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
SYPP08247 AC008507.4-201ENST00000585464 127 ntBASIC2.77□□□□□ -1.97
SYPP08247 ZNF271P-202ENST00000465539 1970 ntBASIC2.77□□□□□ -1.97
SYPP08247 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYPP08247 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.76□□□□□ -1.97
SYPP08247 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SYPP08247 SNORA1-201ENST00000384107 130 ntBASIC2.76□□□□□ -1.97
SYPP08247 MIR181B1-201ENST00000385240 110 ntBASIC2.76□□□□□ -1.97
SYPP08247 SNORD72-201ENST00000390994 80 ntBASIC2.76□□□□□ -1.97
SYPP08247 Y_RNA.617-201ENST00000410920 90 ntBASIC2.76□□□□□ -1.97
SYPP08247 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.76□□□□□ -1.97
SYPP08247 RPS26P45-201ENST00000471748 340 ntBASIC2.76□□□□□ -1.97
SYPP08247 RN7SL636P-201ENST00000497504 294 ntBASIC2.76□□□□□ -1.97
SYPP08247 AC008413.1-201ENST00000511864 177 ntBASIC2.76□□□□□ -1.97
SYPP08247 RNU1-142P-201ENST00000516682 145 ntBASIC2.76□□□□□ -1.97
SYPP08247 RNU1-104P-201ENST00000517280 175 ntBASIC2.76□□□□□ -1.97
SYPP08247 CYCSP26-201ENST00000534107 320 ntBASIC2.76□□□□□ -1.97
SYPP08247 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.76□□□□□ -1.97
SYPP08247 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.75□□□□□ -1.97
SYPP08247 RNA5SP68-201ENST00000363885 119 ntBASIC2.75□□□□□ -1.97
SYPP08247 Y_RNA.267-201ENST00000364679 109 ntBASIC2.75□□□□□ -1.97
SYPP08247 SNORD24-201ENST00000383884 75 ntBASIC2.75□□□□□ -1.97
SYPP08247 MIR1262-201ENST00000408276 93 ntBASIC2.75□□□□□ -1.97
SYPP08247 Y_RNA.630-201ENST00000411370 108 ntBASIC2.75□□□□□ -1.97
SYPP08247 ATP5J2P3-201ENST00000451550 258 ntBASIC2.75□□□□□ -1.97
SYPP08247 RN7SL633P-201ENST00000488974 297 ntBASIC2.75□□□□□ -1.97
SYPP08247 RNU6-1061P-201ENST00000516530 99 ntBASIC2.75□□□□□ -1.97
SYPP08247 Y_RNA.709-201ENST00000516952 92 ntBASIC2.75□□□□□ -1.97
SYPP08247 AC133485.4-201ENST00000561835 220 ntBASIC2.75□□□□□ -1.97
SYPP08247 MTND5P34-201ENST00000568888 325 ntBASIC2.75□□□□□ -1.97
SYPP08247 AC138907.4-201ENST00000570107 226 ntBASIC2.75□□□□□ -1.97
SYPP08247 MIR3129-201ENST00000581095 76 ntBASIC2.75□□□□□ -1.97
SYPP08247 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.75□□□□□ -1.97
SYPP08247 MIR6817-201ENST00000615588 66 ntBASIC2.75□□□□□ -1.97
SYPP08247 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
SYPP08247 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
SYPP08247 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYPP08247 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYPP08247 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.74□□□□□ -1.97
SYPP08247 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
SYPP08247 SNORA63.4-201ENST00000362763 126 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-888P-201ENST00000363010 101 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-647P-201ENST00000364243 107 ntBASIC2.74□□□□□ -1.97
SYPP08247 SNORD61-201ENST00000384252 73 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-160P-201ENST00000384591 107 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-1072P-201ENST00000384703 107 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-443P-201ENST00000384780 107 ntBASIC2.74□□□□□ -1.97
SYPP08247 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
SYPP08247 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.74□□□□□ -1.97
SYPP08247 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
SYPP08247 PDCD5P2-201ENST00000507570 312 ntBASIC2.74□□□□□ -1.97
SYPP08247 SNORD33.1-201ENST00000516213 88 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-589P-201ENST00000516485 107 ntBASIC2.74□□□□□ -1.97
SYPP08247 RNU6-56P-201ENST00000516986 93 ntBASIC2.74□□□□□ -1.97
SYPP08247 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
SYPP08247 AC087685.1-201ENST00000587507 141 ntBASIC2.74□□□□□ -1.97
SYPP08247 AL591926.4-201ENST00000616895 298 ntBASIC2.74□□□□□ -1.97
SYPP08247 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SYPP08247 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SYPP08247 MIR126-201ENST00000362291 85 ntBASIC2.73□□□□□ -1.97
SYPP08247 SNORA1B-201ENST00000362535 133 ntBASIC2.73□□□□□ -1.97
SYPP08247 SNORD58C-201ENST00000365223 64 ntBASIC2.73□□□□□ -1.97
SYPP08247 RNU6-1292P-201ENST00000383856 107 ntBASIC2.73□□□□□ -1.97
SYPP08247 SNORA8-201ENST00000384574 139 ntBASIC2.73□□□□□ -1.97
SYPP08247 MIR515-2-201ENST00000384883 83 ntBASIC2.73□□□□□ -1.97
SYPP08247 MIR515-1-201ENST00000384884 83 ntBASIC2.73□□□□□ -1.97
SYPP08247 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.73□□□□□ -1.97
SYPP08247 AC009238.1-201ENST00000442165 424 ntBASIC2.73□□□□□ -1.97
SYPP08247 AC009237.6-201ENST00000446969 424 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms