Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRIM3O75382 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 RNU6-833P-201ENST00000363486 107 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 RNU6-1175P-201ENST00000365200 107 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 Y_RNA.496-201ENST00000384444 101 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 RNU6-1105P-201ENST00000384774 107 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 LINC01399-202ENST00000458450 244 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 AL008636.1-201ENST00000625038 1018 ntBASIC0.93□□□□□ -2.26
TRIM3O75382 RNU6-1115P-201ENST00000362490 106 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 Y_RNA.70-201ENST00000362886 110 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 Y_RNA.80-201ENST00000362996 102 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RNU1-93P-201ENST00000364704 169 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 Y_RNA.485-201ENST00000384395 102 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RNU6-1009P-201ENST00000390996 107 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RNA5SP247-201ENST00000411181 105 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 MCFD2P1-201ENST00000417812 300 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 MTND1P14-201ENST00000427400 950 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RPL39P39-201ENST00000455840 151 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 FGF7P4-201ENST00000509595 295 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 RN7SKP295-201ENST00000517264 153 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.92□□□□□ -2.26
TRIM3O75382 AC136443.5-201ENST00000603741 370 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 AL357312.1-201ENST00000603879 298 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 AC005972.2-201ENST00000604690 348 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 AL096861.1-201ENST00000610899 123 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 AC027279.3-201ENST00000625055 122 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 AC112487.2-201ENST00000637950 304 ntBASIC0.92□□□□□ -2.26
TRIM3O75382 Y_RNA.230-201ENST00000364348 109 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 Y_RNA.253-201ENST00000364562 112 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 Y_RNA.570-201ENST00000384750 101 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 MIR516B2-201ENST00000385190 85 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 MIR1298-201ENST00000408783 112 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.91□□□□□ -2.26
TRIM3O75382 RPS20P10-201ENST00000451209 253 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 RNU7-152P-201ENST00000458982 64 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 MIR548S-201ENST00000581352 82 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 MIR5188-201ENST00000583467 113 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 RBM11P1-201ENST00000604951 799 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 AL020996.3-201ENST00000606617 222 ntBASIC0.91□□□□□ -2.26
TRIM3O75382 Y_RNA.263-201ENST00000364659 114 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 RNU6-855P-201ENST00000410395 104 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.9□□□□□ -2.27
TRIM3O75382 MTND5P20-201ENST00000448677 143 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.9□□□□□ -2.27
TRIM3O75382 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 MIR3192-201ENST00000584920 77 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 DEFB117-201ENST00000602356 141 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 AC091925.1-201ENST00000623204 462 ntBASIC0.9□□□□□ -2.27
TRIM3O75382 Y_RNA.5-201ENST00000362334 102 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 RNU6-1084P-201ENST00000362498 107 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 U8.5-201ENST00000364528 136 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 Y_RNA.336-201ENST00000365307 109 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 SNORD114-22-201ENST00000365423 72 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 MIR522-201ENST00000385071 87 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 MIR1287-201ENST00000408492 90 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 AL390729.2-201ENST00000416137 156 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 AC063976.4-201ENST00000421971 163 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 AL160004.2-201ENST00000432935 350 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 AC002429.1-201ENST00000437672 148 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 AC005042.3-201ENST00000453230 174 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 SNORD111.1-201ENST00000516421 86 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 RNU4-77P-201ENST00000516692 156 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 MIR4801-201ENST00000582704 82 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 MIR4762-201ENST00000585261 75 ntBASIC0.89□□□□□ -2.27
TRIM3O75382 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRIM3O75382 Y_RNA.39-201ENST00000362620 98 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 SNORD81.1-201ENST00000363064 77 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 Y_RNA.191-201ENST00000363972 113 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 Y_RNA.331-201ENST00000365267 102 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 Y_RNA.458-201ENST00000384240 102 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 SNORA72-201ENST00000384339 132 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 AL590004.1-201ENST00000405321 300 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 AC236972.2-201ENST00000434979 310 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 snoU13.25-201ENST00000458945 104 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 Y_RNA.702-201ENST00000516843 96 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 AC022616.4-201ENST00000522985 181 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.88□□□□□ -2.27
TRIM3O75382 MIR4423-201ENST00000580922 80 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 RPS29P30-201ENST00000600975 111 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 Y_RNA.772-201ENST00000606692 102 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 SNORD58B-201ENST00000607313 66 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 AC010205.1-201ENST00000616668 449 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.88□□□□□ -2.27
TRIM3O75382 AL606534.2-204ENST00000635008 178 ntBASIC0.88□□□□□ -2.27
TRIM3O75382 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
TRIM3O75382 Y_RNA.315-201ENST00000365117 102 ntBASIC0.87□□□□□ -2.27
TRIM3O75382 Y_RNA.341-201ENST00000365341 102 ntBASIC0.87□□□□□ -2.27
TRIM3O75382 RNU6-937P-201ENST00000384325 106 ntBASIC0.87□□□□□ -2.27
TRIM3O75382 MIR452-201ENST00000385020 85 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms