Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.64□□□□□ -2.51
HMGB3O15347 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.64□□□□□ -2.51
HMGB3O15347 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.64□□□□□ -2.51
HMGB3O15347 POLR3GP2-201ENST00000588366 668 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 MIR548AZ-201ENST00000616567 95 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 MIR6740-201ENST00000618268 113 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 AL109933.3-201ENST00000619095 188 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.64□□□□□ -2.51
HMGB3O15347 AC010332.2-201ENST00000613083 1904 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 SNORD14E-201ENST00000364009 85 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 SNORD14C-201ENST00000365382 88 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 RNU6-38P-201ENST00000384085 107 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 MIR1257-201ENST00000408490 117 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.65□□□□□ -2.51
HMGB3O15347 HMGN2P22-201ENST00000427588 175 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 SNRPGP14-201ENST00000435400 219 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 RNU7-175P-201ENST00000515915 61 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
HMGB3O15347 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.65□□□□□ -2.51
HMGB3O15347 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 RNU6-652P-201ENST00000365488 107 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 RNU6-46P-201ENST00000383860 107 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 SNORD126-201ENST00000459475 77 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 MRPS36P3-201ENST00000519284 130 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 AC018448.1-201ENST00000552843 316 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 AC138869.1-201ENST00000568623 124 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 AC006157.1-201ENST00000611750 366 ntBASIC-0.66□□□□□ -2.52
HMGB3O15347 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 RNU6-847P-201ENST00000411115 108 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 MTND4LP11-201ENST00000422184 280 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 MTND3P23-201ENST00000431980 347 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 POLR2KP2-201ENST00000438155 177 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 AL031667.1-201ENST00000440222 725 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 AC090617.3-201ENST00000573670 475 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 MIR3913-1-201ENST00000577744 102 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 FTX_2.1-201ENST00000618816 94 ntBASIC-0.67□□□□□ -2.52
HMGB3O15347 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 SNORA1.2-201ENST00000365189 134 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 SUMO1P3-201ENST00000439961 304 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 RNU6-180P-201ENST00000516697 61 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 RNA5SP47-201ENST00000517230 109 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 RNU7-181P-201ENST00000517234 74 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 MIR3152-201ENST00000579801 74 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 AC125232.2-201ENST00000592457 143 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 AL670379.3-201ENST00000605040 251 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 uc_338.22-201ENST00000622722 187 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 MIR3674-201ENST00000636576 68 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 AC091304.10-201ENST00000641554 121 ntBASIC-0.68□□□□□ -2.52
HMGB3O15347 RNU6-324P-201ENST00000363957 106 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 RNU4-28P-201ENST00000364739 141 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 RNA5SP163-201ENST00000410304 99 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 RNA5SP475-201ENST00000410568 110 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 AC090616.2-202ENST00000584248 222 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 RNU1-29P-201ENST00000606574 126 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 AC092807.2-201ENST00000609367 243 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 AC022306.2-201ENST00000617563 647 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 AC023510.2-201ENST00000622162 746 ntBASIC-0.69□□□□□ -2.52
HMGB3O15347 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 RNU4-66P-201ENST00000365199 138 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 RNU6-128P-201ENST00000383976 107 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 MIR196A2-201ENST00000385189 110 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 RNU6-855P-201ENST00000410395 104 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.7□□□□□ -2.52
HMGB3O15347 USP9YP16-201ENST00000430287 407 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 MTCO1P5-201ENST00000433573 344 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 USP9YP23-201ENST00000455085 407 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 snoU13.16-201ENST00000459350 104 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 MIR3666-201ENST00000607845 111 ntBASIC-0.7□□□□□ -2.52
HMGB3O15347 RNA5SP300-201ENST00000391197 107 ntBASIC-0.71□□□□□ -2.52
HMGB3O15347 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.71□□□□□ -2.52
HMGB3O15347 USMG5P1-201ENST00000425964 177 ntBASIC-0.71□□□□□ -2.52
HMGB3O15347 EIF1P2-201ENST00000428233 350 ntBASIC-0.71□□□□□ -2.52
HMGB3O15347 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.71□□□□□ -2.52
HMGB3O15347 PRDX4P1-201ENST00000507189 574 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms