Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-693P-201ENST00000516134 107 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-1291P-201ENST00000516591 104 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-1270P-201ENST00000517128 108 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-1231P-201ENST00000517185 103 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU7-128P-201ENST00000517247 62 ntBASIC3.13□□□□□ -1.91
SOX1O00570 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.13□□□□□ -1.91
SOX1O00570 AL355297.2-201ENST00000604792 129 ntBASIC3.13□□□□□ -1.91
SOX1O00570 MIR6079-201ENST00000635807 62 ntBASIC3.13□□□□□ -1.91
SOX1O00570 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SOX1O00570 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX1O00570 AC096644.4-201ENST00000563417 2912 ntBASIC3.12□□□□□ -1.91
SOX1O00570 Y_RNA.116-201ENST00000363292 103 ntBASIC3.12□□□□□ -1.91
SOX1O00570 RNA5SP467-201ENST00000391274 118 ntBASIC3.12□□□□□ -1.91
SOX1O00570 AC007064.1-201ENST00000412238 351 ntBASIC3.12□□□□□ -1.91
SOX1O00570 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX1O00570 AL353689.1-201ENST00000438895 199 ntBASIC3.12□□□□□ -1.91
SOX1O00570 Y_RNA.666-201ENST00000516187 112 ntBASIC3.12□□□□□ -1.91
SOX1O00570 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX1O00570 MIR3186-201ENST00000577404 85 ntBASIC3.12□□□□□ -1.91
SOX1O00570 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
SOX1O00570 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX1O00570 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX1O00570 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SOX1O00570 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SOX1O00570 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX1O00570 Y_RNA.267-201ENST00000364679 109 ntBASIC3.11□□□□□ -1.91
SOX1O00570 Y_RNA.281-201ENST00000364774 94 ntBASIC3.11□□□□□ -1.91
SOX1O00570 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.11□□□□□ -1.91
SOX1O00570 SNRPGP13-201ENST00000442212 177 ntBASIC3.11□□□□□ -1.91
SOX1O00570 RPS29P24-201ENST00000486345 171 ntBASIC3.11□□□□□ -1.91
SOX1O00570 RNU1-142P-201ENST00000516682 145 ntBASIC3.11□□□□□ -1.91
SOX1O00570 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.11□□□□□ -1.91
SOX1O00570 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX1O00570 MIR338-201ENST00000636369 67 ntBASIC3.11□□□□□ -1.91
SOX1O00570 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SOX1O00570 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SOX1O00570 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX1O00570 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
SOX1O00570 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SOX1O00570 MIR126-201ENST00000362291 85 ntBASIC3.1□□□□□ -1.91
SOX1O00570 SNORD77.3-201ENST00000391113 65 ntBASIC3.1□□□□□ -1.91
SOX1O00570 EDDM3CP-201ENST00000415977 425 ntBASIC3.1□□□□□ -1.91
SOX1O00570 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
SOX1O00570 RNU6-1041P-201ENST00000516254 102 ntBASIC3.1□□□□□ -1.91
SOX1O00570 RNU6-1149P-201ENST00000516810 97 ntBASIC3.1□□□□□ -1.91
SOX1O00570 ZNF271P-202ENST00000465539 1970 ntBASIC3.1□□□□□ -1.91
SOX1O00570 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SOX1O00570 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SOX1O00570 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SOX1O00570 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SOX1O00570 AP006437.1-201ENST00000641440 3685 ntBASIC3.09□□□□□ -1.91
SOX1O00570 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SOX1O00570 MIR450A1-201ENST00000362262 91 ntBASIC3.09□□□□□ -1.91
SOX1O00570 SNORD114-30-201ENST00000364448 72 ntBASIC3.09□□□□□ -1.91
SOX1O00570 Y_RNA.355-201ENST00000365462 98 ntBASIC3.09□□□□□ -1.91
SOX1O00570 RN7SKP223-201ENST00000410582 62 ntBASIC3.09□□□□□ -1.91
SOX1O00570 FTH1P12-201ENST00000432137 551 ntBASIC3.09□□□□□ -1.91
SOX1O00570 AC245517.4-201ENST00000448601 281 ntBASIC3.09□□□□□ -1.91
SOX1O00570 SCARNA15-202ENST00000516881 127 ntBASIC3.09□□□□□ -1.91
SOX1O00570 AC007012.1-201ENST00000567192 175 ntBASIC3.09□□□□□ -1.91
SOX1O00570 AL353149.1-201ENST00000610667 244 ntBASIC3.09□□□□□ -1.91
SOX1O00570 AL137067.1-201ENST00000615933 120 ntBASIC3.09□□□□□ -1.91
SOX1O00570 U6.108-201ENST00000637764 58 ntBASIC3.09□□□□□ -1.91
SOX1O00570 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.09□□□□□ -1.92
SOX1O00570 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.08□□□□□ -1.92
SOX1O00570 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SOX1O00570 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 RNA5SP125-201ENST00000364843 120 ntBASIC3.08□□□□□ -1.92
SOX1O00570 RNU6-106P-201ENST00000384405 107 ntBASIC3.08□□□□□ -1.92
SOX1O00570 MIR548A2-201ENST00000384956 97 ntBASIC3.08□□□□□ -1.92
SOX1O00570 MIR9-1-201ENST00000385198 89 ntBASIC3.08□□□□□ -1.92
SOX1O00570 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 CALM2P4-201ENST00000430810 426 ntBASIC3.08□□□□□ -1.92
SOX1O00570 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
SOX1O00570 HMGN2P23-201ENST00000456759 269 ntBASIC3.08□□□□□ -1.92
SOX1O00570 RNU7-94P-201ENST00000459576 63 ntBASIC3.08□□□□□ -1.92
SOX1O00570 AL049830.1-201ENST00000468034 425 ntBASIC3.08□□□□□ -1.92
SOX1O00570 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.08□□□□□ -1.92
SOX1O00570 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 uc_338.28-201ENST00000612082 187 ntBASIC3.08□□□□□ -1.92
SOX1O00570 AL591926.4-201ENST00000616895 298 ntBASIC3.08□□□□□ -1.92
SOX1O00570 AC007318.2-201ENST00000620999 243 ntBASIC3.08□□□□□ -1.92
SOX1O00570 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SOX1O00570 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SOX1O00570 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.08□□□□□ -1.92
SOX1O00570 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX1O00570 MIR30E-201ENST00000362104 92 ntBASIC3.07□□□□□ -1.92
SOX1O00570 MIR570-201ENST00000384917 97 ntBASIC3.07□□□□□ -1.92
SOX1O00570 AL138827.1-201ENST00000402666 306 ntBASIC3.07□□□□□ -1.92
SOX1O00570 SRIP3-201ENST00000413200 219 ntBASIC3.07□□□□□ -1.92
SOX1O00570 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
SOX1O00570 RN7SL499P-201ENST00000481141 276 ntBASIC3.07□□□□□ -1.92
SOX1O00570 COX6CP6-201ENST00000490840 228 ntBASIC3.07□□□□□ -1.92
SOX1O00570 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.07□□□□□ -1.92
SOX1O00570 Y_RNA.677-201ENST00000516401 85 ntBASIC3.07□□□□□ -1.92
SOX1O00570 RNU6-667P-201ENST00000517186 102 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 259.1 ms