Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR7975-201ENST00000619350 68 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 MIR208A-201ENST00000362287 71 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 RNU6-1298P-201ENST00000362456 101 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.528-201ENST00000384575 108 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 MIR570-201ENST00000384917 97 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 MIR23A-201ENST00000385245 73 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 RPL23AP83-201ENST00000434984 473 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 RN7SL499P-201ENST00000481141 276 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 SNORD45.4-201ENST00000516629 73 ntBASIC2.63□□□□□ -1.99
SHISA3A0PJX4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHISA3A0PJX4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 AC073346.2-201ENST00000624724 2058 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.43-201ENST00000362670 111 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 RNU6-268P-201ENST00000364174 107 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 MIR490-201ENST00000384865 128 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 CALM2P4-201ENST00000430810 426 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 AC107083.1-201ENST00000439643 279 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 Z96811.1-201ENST00000445880 108 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 RNU7-25P-201ENST00000516544 62 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 MIR376A2-201ENST00000636782 80 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.62□□□□□ -1.99
SHISA3A0PJX4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHISA3A0PJX4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHISA3A0PJX4 AC108206.1-201ENST00000570186 4159 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 RNU1-58P-201ENST00000362413 163 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.281-201ENST00000364774 94 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.61□□□□□ -1.99
SHISA3A0PJX4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
SHISA3A0PJX4 AC069257.2-201ENST00000441819 155 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.61□□□□□ -1.99
SHISA3A0PJX4 AC069114.2-201ENST00000604699 304 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 SNORA28-201ENST00000606769 126 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.61□□□□□ -1.99
SHISA3A0PJX4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SHISA3A0PJX4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHISA3A0PJX4 AC008555.8-201ENST00000623602 2168 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 RNU1-33P-201ENST00000364249 162 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 SNORA2.2-201ENST00000365473 135 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 RNVU1-14-201ENST00000384770 164 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 AL445646.1-201ENST00000431784 216 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 AL606517.2-201ENST00000442855 241 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 AC087499.4-201ENST00000448505 178 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 SNORA70.24-201ENST00000517233 118 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 AC022513.1-201ENST00000624512 117 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.6□□□□□ -1.99
SHISA3A0PJX4 AL035425.3-201ENST00000564206 4996 ntBASIC2.6□□□□□ -1.99
SHISA3A0PJX4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.59□□□□□ -1.99
SHISA3A0PJX4 SNORA7.4-201ENST00000384249 137 ntBASIC2.59□□□□□ -1.99
SHISA3A0PJX4 AL031737.1-201ENST00000450125 223 ntBASIC2.59□□□□□ -1.99
SHISA3A0PJX4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 RNU6-168P-201ENST00000516189 101 ntBASIC2.59□□□□□ -1.99
SHISA3A0PJX4 RNA5SP170-201ENST00000517150 101 ntBASIC2.59□□□□□ -1.99
SHISA3A0PJX4 UBL5P2-201ENST00000583788 219 ntBASIC2.59□□□□□ -1.99
SHISA3A0PJX4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHISA3A0PJX4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.59□□□□□ -2
SHISA3A0PJX4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.59□□□□□ -2
SHISA3A0PJX4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.59□□□□□ -2
SHISA3A0PJX4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.59□□□□□ -2
SHISA3A0PJX4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHISA3A0PJX4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHISA3A0PJX4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SHISA3A0PJX4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHISA3A0PJX4 MIR483-201ENST00000385070 76 ntBASIC2.58□□□□□ -2
SHISA3A0PJX4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
SHISA3A0PJX4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.58□□□□□ -2
SHISA3A0PJX4 RNU7-70P-201ENST00000516941 66 ntBASIC2.58□□□□□ -2
SHISA3A0PJX4 AC007012.1-201ENST00000567192 175 ntBASIC2.58□□□□□ -2
SHISA3A0PJX4 MIR5195-201ENST00000583555 115 ntBASIC2.58□□□□□ -2
SHISA3A0PJX4 MIR8054-201ENST00000620877 86 ntBASIC2.58□□□□□ -2
SHISA3A0PJX4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.58□□□□□ -2
SHISA3A0PJX4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
SHISA3A0PJX4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHISA3A0PJX4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms