Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 SNORD45.4-201ENST00000516629 73 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 AC006362.1-201ENST00000567392 174 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-454P-201ENST00000364292 107 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.256-201ENST00000364594 104 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.359-201ENST00000365498 102 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-259P-201ENST00000383999 107 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-1119P-201ENST00000384349 108 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 MIR489-201ENST00000384923 84 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 MIR190B-201ENST00000401119 79 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 MIR1302-7-201ENST00000408841 72 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 DLGAP5P1-201ENST00000430307 464 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-63P-201ENST00000516690 95 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 AL357075.2-201ENST00000614906 189 ntBASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.17□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.112-201ENST00000363250 102 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-396P-201ENST00000365369 105 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 MIR193B-201ENST00000384907 83 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 MTND1P26-201ENST00000440488 538 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 MIR5701-3-201ENST00000578890 82 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 MIR5701-1-201ENST00000585138 82 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 MIR5701-2-201ENST00000615634 82 ntBASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.16□□□□□ -2.38
RHBDD3Q9Y3P4 MIR103A1-201ENST00000362165 78 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-654P-201ENST00000364373 107 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 SNORD116-8-201ENST00000384365 95 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-306P-201ENST00000384617 107 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 DEFB108C-201ENST00000400154 252 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-908P-201ENST00000410160 94 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 AC010486.3-201ENST00000511602 785 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 RNU1-54P-201ENST00000517181 120 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 AL355375.2-201ENST00000574825 175 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 AC078883.4-201ENST00000623218 367 ntBASIC0.15□□□□□ -2.39
RHBDD3Q9Y3P4 MIR377-201ENST00000362145 69 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 RNY3P3-201ENST00000363816 102 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-879P-201ENST00000364328 108 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 Y_RNA.253-201ENST00000364562 112 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-700P-201ENST00000391043 107 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 AC019235.1-201ENST00000503847 207 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-1337P-201ENST00000516525 95 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 AC092634.7-201ENST00000621022 103 ntBASIC0.14□□□□□ -2.39
RHBDD3Q9Y3P4 MIR18A-201ENST00000362310 71 ntBASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 MT-TN-201ENST00000387400 73 ntBASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-131P-201ENST00000391144 107 ntBASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 RNU2-70P-201ENST00000410718 179 ntBASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 MIR1273G-201ENST00000577677 100 ntBASIC0.13□□□□□ -2.39
RHBDD3Q9Y3P4 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 MTCO3P10-201ENST00000455912 772 ntBASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 SNORD5.1-201ENST00000458800 75 ntBASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 SNORA40.9-201ENST00000515895 93 ntBASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-451P-201ENST00000362921 107 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 SNORD115-30-201ENST00000364117 82 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-580P-201ENST00000365159 107 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-483P-201ENST00000384088 108 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-1013P-201ENST00000384180 107 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 MIR520H-201ENST00000385126 88 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 RNA5SP95-201ENST00000410319 137 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 RNU6-373P-201ENST00000411247 98 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 AL390729.2-201ENST00000416137 156 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 MLLT10P1-201ENST00000418346 262 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 AC105029.1-201ENST00000520250 669 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 AL162730.1-201ENST00000605734 292 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 MIR7111-201ENST00000619751 72 ntBASIC0.11□□□□□ -2.39
RHBDD3Q9Y3P4 SNORD114-26-201ENST00000363543 72 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 SNORD38C-201ENST00000384381 69 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 Y_RNA.557-201ENST00000384680 107 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 SNORD71-201ENST00000411292 86 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 AC092989.1-201ENST00000481235 277 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 OSBPL9P5-201ENST00000542581 171 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 MIR3974-201ENST00000637126 96 ntBASIC0.1□□□□□ -2.39
RHBDD3Q9Y3P4 MIR520F-201ENST00000384824 87 ntBASIC0.09□□□□□ -2.4
RHBDD3Q9Y3P4 RNU6-332P-201ENST00000391193 108 ntBASIC0.09□□□□□ -2.4
RHBDD3Q9Y3P4 USP9YP30-201ENST00000430729 455 ntBASIC0.09□□□□□ -2.4
RHBDD3Q9Y3P4 RNU7-87P-201ENST00000459343 62 ntBASIC0.09□□□□□ -2.4
RHBDD3Q9Y3P4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.09□□□□□ -2.4
RHBDD3Q9Y3P4 RNU6-863P-201ENST00000515989 104 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms