Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL359075.3-201ENST00000613288 217 ntBASIC3.65□□□□□ -1.83
CCDC85AQ96PX6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC85AQ96PX6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC85AQ96PX6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC85AQ96PX6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC85AQ96PX6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 SNORD56.5-201ENST00000364281 72 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 Y_RNA.253-201ENST00000364562 112 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 SNORA1-201ENST00000384107 130 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 RPL32P35-201ENST00000415214 394 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC244505.4-201ENST00000434905 287 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 SSXP5-201ENST00000443473 287 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC233266.1-201ENST00000454518 96 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 RNA5SP236-201ENST00000516169 116 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 MIR4319-201ENST00000577285 85 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC008507.4-201ENST00000585464 127 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 RPL12P50-201ENST00000603116 116 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC242852.1-201ENST00000612151 96 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 AC244015.1-201ENST00000622301 99 ntBASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC85AQ96PX6 RNU1-23P-201ENST00000363361 144 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 AC105272.1-201ENST00000438604 198 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 AL353689.1-201ENST00000438895 199 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 RN7SL442P-201ENST00000473804 320 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 RPS29P24-201ENST00000486345 171 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 AC096725.1-201ENST00000514266 313 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 RNU6-341P-201ENST00000516973 96 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 MIR4298-201ENST00000584380 73 ntBASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC85AQ96PX6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 MIR449A-201ENST00000362113 91 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 SNORD61-201ENST00000384252 73 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 Y_RNA.495-201ENST00000384435 112 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 MIR561-201ENST00000385216 97 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 MIR1263-201ENST00000408324 86 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 AC007064.1-201ENST00000412238 351 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 AC023141.11-201ENST00000508864 202 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85AQ96PX6 MIR340-201ENST00000362125 95 ntBASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 Y_RNA.116-201ENST00000363292 103 ntBASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 Y_RNA.528-201ENST00000384575 108 ntBASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 RNU6-1270P-201ENST00000517128 108 ntBASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 MIR4513-201ENST00000581077 86 ntBASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 MIR6079-201ENST00000635807 62 ntBASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC85AQ96PX6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 Y_RNA.281-201ENST00000364774 94 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 SNORA12.1-201ENST00000390873 148 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 AC087499.2-201ENST00000432861 149 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 SNRPGP13-201ENST00000442212 177 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 RNU7-94P-201ENST00000459576 63 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 RNU6-1291P-201ENST00000516591 104 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 RNU1-142P-201ENST00000516682 145 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 AL355297.2-201ENST00000604792 129 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 AL353149.1-201ENST00000610667 244 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 MIR4679-1-201ENST00000637619 75 ntBASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCDC85AQ96PX6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 MIR515-2-201ENST00000384883 83 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 MIR515-1-201ENST00000384884 83 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 MIR570-201ENST00000384917 97 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 RNU2-48P-201ENST00000410694 191 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 RNU6-693P-201ENST00000516134 107 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 RNU7-128P-201ENST00000517247 62 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 IGKV1-22-201ENST00000524313 326 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 ELOCP29-201ENST00000588193 334 ntBASIC3.59□□□□□ -1.83
CCDC85AQ96PX6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC85AQ96PX6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC85AQ96PX6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 ZNF271P-202ENST00000465539 1970 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 MIR126-201ENST00000362291 85 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP125-201ENST00000364843 120 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 MIR802-201ENST00000390235 94 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 SNORD72-201ENST00000390994 80 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 COX6CP6-201ENST00000490840 228 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 RNU6-1149P-201ENST00000516810 97 ntBASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms