Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
SCAMP4Q969E2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
SCAMP4Q969E2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SCAMP4Q969E2 AC018630.2-201ENST00000534866 2403 ntBASIC2.25□□□□□ -2.05
SCAMP4Q969E2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SCAMP4Q969E2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCAMP4Q969E2 ZNF271P-202ENST00000465539 1970 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 snoU2_19.4-201ENST00000364329 80 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.555-201ENST00000384673 110 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 RN7SKP51-201ENST00000410781 304 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 AC245047.8-201ENST00000456455 284 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 RNU6-1219P-201ENST00000516143 112 ntBASIC2.24□□□□□ -2.05
SCAMP4Q969E2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.24□□□□□ -2.05
SCAMP4Q969E2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCAMP4Q969E2 ZNF658B-202ENST00000615961 3375 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.182-201ENST00000363880 111 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 RNU4-41P-201ENST00000364426 143 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.435-201ENST00000384095 112 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 RNU6-886P-201ENST00000384319 105 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 RNA5SP465-201ENST00000391195 109 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 MIR1278-201ENST00000408753 81 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.23□□□□□ -2.05
SCAMP4Q969E2 RN7SKP164-201ENST00000516138 266 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 MIR5094-201ENST00000578766 85 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 AC091178.2-201ENST00000584401 117 ntBASIC2.23□□□□□ -2.05
SCAMP4Q969E2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.23□□□□□ -2.05
SCAMP4Q969E2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCAMP4Q969E2 AC131280.1-202ENST00000624067 4211 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 AC100821.1-201ENST00000523153 2479 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.229-201ENST00000364347 113 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.22□□□□□ -2.05
SCAMP4Q969E2 RPS26P45-201ENST00000471748 340 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 AC074198.2-201ENST00000508153 258 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.662-201ENST00000516028 97 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 RNU6-1007P-201ENST00000516586 107 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 RNU6-453P-201ENST00000516819 85 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 MIR3945-201ENST00000581853 98 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 AC069114.2-201ENST00000604699 304 ntBASIC2.22□□□□□ -2.05
SCAMP4Q969E2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCAMP4Q969E2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCAMP4Q969E2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
SCAMP4Q969E2 Y_RNA.121-201ENST00000363309 113 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RNU6-674P-201ENST00000363831 107 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 MT-TT-201ENST00000387460 66 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RNA5SP425-201ENST00000410336 112 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RN7SKP223-201ENST00000410582 62 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RNU7-94P-201ENST00000459576 63 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 SCARNA8-201ENST00000515924 131 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 Y_RNA.797-201ENST00000515977 94 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RNU7-193P-201ENST00000516723 65 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 RNU6-341P-201ENST00000516973 96 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 MIR5688-201ENST00000580619 83 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 AC245884.12-201ENST00000615364 59 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 AC010297.1-201ENST00000623948 149 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 Z82195.2-201ENST00000612348 18351 ntBASIC2.21□□□□□ -2.06
SCAMP4Q969E2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 RNU6-103P-201ENST00000363686 107 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 MIR616-201ENST00000385293 97 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 PCNPP3-201ENST00000393579 471 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 AL356320.1-201ENST00000429616 163 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 AC084364.2-201ENST00000546924 395 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAMP4Q969E2 MIR4744-201ENST00000581563 82 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 AL137847.3-201ENST00000611521 109 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
SCAMP4Q969E2 U8.2-201ENST00000363156 134 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 Y_RNA.180-201ENST00000363867 113 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 Y_RNA.240-201ENST00000364469 95 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 RNU1-138P-201ENST00000384093 164 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 AL512604.1-201ENST00000404812 257 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAMP4Q969E2 RNU1-41P-201ENST00000516161 162 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 RNU1-48P-201ENST00000516400 162 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 SNORA31.25-201ENST00000517242 134 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 RPL23AP91-201ENST00000569211 455 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 U6.106-201ENST00000636360 105 ntBASIC2.19□□□□□ -2.06
SCAMP4Q969E2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCAMP4Q969E2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SCAMP4Q969E2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SCAMP4Q969E2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
SCAMP4Q969E2 SNORA70B-201ENST00000384210 135 ntBASIC2.18□□□□□ -2.06
SCAMP4Q969E2 MIR562-201ENST00000384894 95 ntBASIC2.18□□□□□ -2.06
SCAMP4Q969E2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SCAMP4Q969E2 RNA5SP109-201ENST00000391010 116 ntBASIC2.18□□□□□ -2.06
SCAMP4Q969E2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.18□□□□□ -2.06
SCAMP4Q969E2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms