Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNU6-654P-201ENST00000364373 107 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 SNORD116-8-201ENST00000384365 95 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.498-201ENST00000384460 102 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 RNU6-136P-201ENST00000384663 107 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 MIR573-201ENST00000384964 99 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 MIR522-201ENST00000385071 87 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 AL358176.2-201ENST00000425769 204 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 DLGAP5P1-201ENST00000430307 464 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 SNORD123-201ENST00000459473 70 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 MTND2P38-201ENST00000522536 667 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 MIR4300-201ENST00000581016 96 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.2□□□□□ -2.38
CLHC1Q8NHS4 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNU6-369P-201ENST00000362515 102 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNU6-451P-201ENST00000362921 107 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNU4-45P-201ENST00000365469 141 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNU6-259P-201ENST00000383999 107 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNU6-306P-201ENST00000384617 107 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 MTND2P9-201ENST00000422293 931 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNU6-1281P-201ENST00000516223 105 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNA5SP330-201ENST00000517096 96 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 NBR2-204ENST00000587322 63 ntBASIC0.19□□□□□ -2.38
CLHC1Q8NHS4 RNA5SP457-201ENST00000363657 124 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.364-201ENST00000365532 101 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 MIR190B-201ENST00000401119 79 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 RNA5SP475-201ENST00000410568 110 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 RNU2-70P-201ENST00000410718 179 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 AC116353.2-201ENST00000505332 712 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 SNORD45.4-201ENST00000516629 73 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 MIR4251-201ENST00000635819 61 ntBASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
CLHC1Q8NHS4 RNY3P3-201ENST00000363816 102 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 RNU6-483P-201ENST00000384088 108 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 RNU6-1042P-201ENST00000384204 107 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 RNA5SP127-201ENST00000411051 133 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 HMGN2P32-201ENST00000444648 269 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 UBE2V1P7-201ENST00000446395 340 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 RNU6-625P-201ENST00000459412 107 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 AC022616.4-201ENST00000522985 181 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 AL355375.2-201ENST00000574825 175 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 AC015726.2-201ENST00000620112 122 ntBASIC0.17□□□□□ -2.38
CLHC1Q8NHS4 Y_RNA.253-201ENST00000364562 112 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 RNU6-842P-201ENST00000384269 107 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 SNORA2B-201ENST00000384583 137 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 MIR625-201ENST00000385047 85 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 RNU2-66P-201ENST00000410650 161 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 MTCO3P10-201ENST00000455912 772 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 SNORD5.1-201ENST00000458800 75 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 AC010486.3-201ENST00000511602 785 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 SNORA25.10-201ENST00000515926 124 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 RNU6-1337P-201ENST00000516525 95 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 MIR2115-201ENST00000516657 100 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 AC093027.1-201ENST00000546698 429 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 AL355073.2-201ENST00000612106 557 ntBASIC0.16□□□□□ -2.38
CLHC1Q8NHS4 MIR18A-201ENST00000362310 71 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 SNORD115-30-201ENST00000364117 82 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 RNU6-580P-201ENST00000365159 107 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 RNU6-1310P-201ENST00000384153 107 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.557-201ENST00000384680 107 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 U8.19-201ENST00000459095 133 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 U8.22-201ENST00000459141 133 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 RNU2-12P-201ENST00000517216 168 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 AC105029.1-201ENST00000520250 669 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 OSBPL9P5-201ENST00000542581 171 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 MIR3942-201ENST00000585264 109 ntBASIC0.15□□□□□ -2.39
CLHC1Q8NHS4 MIR377-201ENST00000362145 69 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 MIR103A1-201ENST00000362165 78 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNY1P16-201ENST00000363063 111 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNU6-1059P-201ENST00000363752 98 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 snoU2-30.1-201ENST00000365012 70 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNU6-780P-201ENST00000391030 104 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNU6-332P-201ENST00000391193 108 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 MIR1197-201ENST00000408818 88 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNA5SP95-201ENST00000410319 137 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms