Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU7-34P-201ENST00000459394 64 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 RPS26P45-201ENST00000471748 340 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 SEPT14P8-201ENST00000508026 178 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.47□□□□□ -2.17
RTL3Q8N8U3 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 AC006380.1-201ENST00000603598 186 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 SNORD113-5-201ENST00000607261 78 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
RTL3Q8N8U3 U8.1-201ENST00000362843 134 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.64-201ENST00000362845 102 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 SNORD113-8-201ENST00000363497 74 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 SNORA33-201ENST00000363664 130 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.286-201ENST00000364813 102 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 RNU6-102P-201ENST00000384485 104 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AL031003.1-201ENST00000404229 172 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 RNU4-62P-201ENST00000410125 130 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.46□□□□□ -2.18
RTL3Q8N8U3 RPL21P38-201ENST00000418090 167 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AL135790.2-201ENST00000437701 267 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AC027119.1-201ENST00000440877 241 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 MRPS10P1-201ENST00000448483 130 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 MTATP8P1-201ENST00000467115 207 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.46□□□□□ -2.18
RTL3Q8N8U3 RNU6-155P-201ENST00000516347 100 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 SNORA40.15-201ENST00000516884 107 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AP003733.2-201ENST00000529409 171 ntBASIC1.46□□□□□ -2.18
RTL3Q8N8U3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.46□□□□□ -2.18
RTL3Q8N8U3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.46□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 RNU6-117P-201ENST00000365415 107 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 RNU6-203P-201ENST00000384038 104 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 RNU6-950P-201ENST00000384651 107 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.574-201ENST00000384766 95 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 RNU4-30P-201ENST00000410245 143 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 AL161935.2-201ENST00000414627 60 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.45□□□□□ -2.18
RTL3Q8N8U3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 HSPE1P13-201ENST00000451143 297 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
RTL3Q8N8U3 RNU7-110P-201ENST00000516891 62 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.45□□□□□ -2.18
RTL3Q8N8U3 AL137100.2-201ENST00000555786 315 ntBASIC1.45□□□□□ -2.18
RTL3Q8N8U3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RTL3Q8N8U3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNU4-90P-201ENST00000362773 141 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNU1-22P-201ENST00000363334 158 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.136-201ENST00000363444 102 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.459-201ENST00000384251 102 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 MIR215-201ENST00000384858 110 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNA5SP467-201ENST00000391274 118 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AC098869.1-201ENST00000481627 292 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AC099513.1-201ENST00000490423 301 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AC097462.1-201ENST00000514125 324 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 MTCO2P24-201ENST00000515611 426 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNA5SP20-201ENST00000515976 84 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNU7-99P-201ENST00000516271 62 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNY3P15-201ENST00000516297 97 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNU6-635P-201ENST00000516651 102 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 RNU1-142P-201ENST00000516682 145 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AL161670.1-201ENST00000554348 137 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AC015688.6-201ENST00000577737 104 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 MIR4438-201ENST00000585271 93 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.84-201ENST00000363011 104 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 RNU6-1309P-201ENST00000363305 108 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 RNU6-290P-201ENST00000365212 101 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 SNORA4.2-201ENST00000365313 147 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 RNU6-472P-201ENST00000384299 107 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 RNU6-21P-201ENST00000384710 107 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 MIR568-201ENST00000385036 95 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 RPS27P16-201ENST00000425758 201 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 MTCYBP9-201ENST00000431021 303 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 HMGN1P10-201ENST00000474557 553 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 SNORA70.12-201ENST00000516084 153 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 AC023157.2-201ENST00000540596 141 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.43□□□□□ -2.18
RTL3Q8N8U3 AP000942.3-201ENST00000603702 160 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 AL359075.3-201ENST00000613288 217 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 MIR8062-201ENST00000621515 85 ntBASIC1.43□□□□□ -2.18
RTL3Q8N8U3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 RNU6-505P-201ENST00000384427 107 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 AC004965.1-201ENST00000413033 213 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 RPL30P13-201ENST00000418873 348 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms